Sciurus carolinensis (gray squirrel): 124992709
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Entry
124992709 CDS
T08117
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00100
Steroid biosynthesis
ncar01100
Metabolic pathways
Module
ncar_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124992709
Enzymes [BR:
ncar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
124992709
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
124992709
NCBI-ProteinID:
XP_047419838
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Position
9:complement(141090077..141117742)
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AA seq
733 aa
AA seq
DB search
MMEGTCLRRRGGPRKTEPASDLSRWRLRNELGRQTWTYCGGDDDAGRPQTGLEAHSVGLD
TSSYFKDLPKAHTAREGALNGVTFYVGLQAEDGHWAGDYGGPLFLLPGLLITCHTAHIPL
PAGYREEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVALRILGVDPDDPDLVRARNI
LHQKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWMPAHPSTLWCHCRQVYLP
MSYCYATRLSASEDPLVQSLRQELYVEDYASIDWPAQRNNVAQEEQYTPHSWLLRVTYAV
LNLYERYHSSSLRRRAVQLLYEHIAADDRFTKCLSIGPISKNINMLVRWSVDGPASSAFQ
EHISRIPDFLWMGLDGLKMQGTNGSQIWDTAFAIQALLEAGAHHRPEFLSCLQKAHEFLR
LSQVPDNPPDYEKYYRQMNKGGFCFSTLDCNWIVADCTAEALKSVMLLQEKCPSITQHIP
RERLFDAVAVLLSMRNPDGGFATYETKRGGHLLELLNPSEIFGDIMIDYTYVECTSAVMQ
ALRLFHKHCPGHRAVEIRETLERGLAFCRQKQRADGSWEGSWGVCFTYGTWFGLEAFACM
GHTYQDGVACEEVSRACSFLLSLQMVDGGWGEDFESCEQRCYVQSAESQIHNTCWALMGL
MAVRHPDVAAQERGVQCLLEKQLPNGDWPQENISGVFNKSCAISYTNYKNIFPIWVLGRF
ANLYPERALAGRP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggcacgtgtctgcggcgccgaggcggaccccgcaaaaccgagccggcctcc
gacctcagccgctggcggctccgcaacgagctggggcggcagacgtggacgtactgcggc
ggggacgacgacgctggccgcccgcagactggtctggaggcgcactcggtggggctggac
accagcagttactttaaggacttgcccaaagctcacacggctcgtgaaggagctctgaac
ggagtaacattttatgtaggactgcaggctgaggatgggcactgggcaggtgattacggt
ggccctctcttcctcttgccaggactcctgatcacgtgccacacagctcacatccctctg
ccggctgggtacagagaggagatggtacggtacctgagatcagtacagctccctgatggt
ggctggggcctgcacattgaggacaagtccacagtgtttgggactgcactcaactatgtg
gctctcagaatcctaggtgttgaccctgatgatcctgacctggtacgagcccggaacatt
cttcaccagaaaggtggtgctgtggctatcccctcctggggcaagttctggctggcggtc
ctgaacgtctacagctgggaaggcctgaacaccctgttccctgagatgtggctgtttcct
gactggatgcccgcgcacccctccacactctggtgccactgtcggcaggtctacctcccc
atgagctactgctatgccacccggctgagcgcctcagaggacccactggtccagagcctc
cgccaggagctctatgtggaggactatgccagtatcgactggccagcacagaggaacaat
gtggcccaagaagagcagtacacaccacacagttggctcctgcgcgtcacgtacgctgtc
ctcaacctgtatgagcgctaccatagctccagcctgcggcggcgggctgtccagctgctg
tacgagcacatcgctgcagatgatcgcttcaccaagtgcctcagcattggcccgatctca
aagaacatcaacatgcttgtgcgctggtctgtggacgggccggcctcctctgctttccag
gaacacatctccaggatcccagatttcctctggatgggcctggacggcttgaaaatgcag
ggcaccaatggctcacagatctgggacaccgcatttgccatacaagctctgcttgaggca
ggcgctcaccacaggccagagttcttgtcctgcctgcagaaggcacatgagttcctgcga
ctgtcacaggtccctgacaaccctcctgactacgagaagtactaccgccagatgaacaag
ggtggcttctgcttcagcactctggactgcaactggatcgttgctgactgcacggctgag
gccctgaagtctgtgatgctcctgcaggagaagtgtccctccatcacccagcacatcccc
cgagagcggctctttgatgctgtggctgtgctgctgagcatgaggaatcctgatggaggg
ttcgccacctatgagaccaagcgtgggggacacttgctggagctgctgaacccttctgag
atctttggggacatcatgatcgactacacgtacgtggagtgcacctcggcagtgatgcag
gcactgaggctgttccacaagcactgcccgggccacagagcagtggagatcagggaaaca
ctggagcggggcctggcgttctgccggcagaagcagagggcggatggctcctgggagggc
tcctggggggtttgcttcacctacggcacctggtttggcctggaagctttcgcctgcatg
gggcacacctaccaagacggggttgcctgtgaggaggtgtcccgggcctgcagcttcctg
ctgtccctgcagatggtggatggaggctggggggaggactttgagtcctgtgagcagcgg
tgctatgtgcagagtgccgagtcccagatccacaacacgtgctgggccctgatgggactg
atggctgtcaggcatcctgatgttgcagcccaggagagaggggtccagtgtctgctggag
aagcaacttcccaatggtgattggccccaggagaacatctccggggtcttcaacaagtcc
tgtgccatcagctacacgaactacaagaacatcttccccatctgggtcctgggccgcttc
gccaacctgtaccccgagagagccctcgctggccgcccttga
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