Sciurus carolinensis (gray squirrel): 124992738
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Entry
124992738 CDS
T08117
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124992738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124992738
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124992738
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Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
124992738
NCBI-ProteinID:
XP_047419936
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All DBs
Position
9:44250209..44927778
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AA seq
843 aa
AA seq
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MARPRCMWPDYVWRAVMAGLVHRGLGASLTLCILGCLLQAAHVLSQKLDDVDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDVRNATQFAPVCPQN
IIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDGPLTKKQTDDLGDNDG
AEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLST
GDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGNR
WSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKVGCNVSDTVELVECLQKKPYK
ELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVENIV
DSDDGISASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRHNPETRRKTLLALF
TDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDEVPYVLGIPMIGP
TELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQ
KDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDISQYTSTTTKVPSTDITLRPTR
KNSVPVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTIAVGASLLFLNILAFAALYYK
KDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDLDHECESIHPHEVVLRTACPP
DYTLAMRRSPDDVPLMTPNTITMIPNTIPGIQPLHTFNTFTGGQNNTLPHPHPHPHSHST
TRV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcccagatgcatgtggccagattatgtttggagagcagtgatggcaggcttg
gtacacaggggattgggcgcctcgttgactctgtgtatactgggatgtttgcttcaggct
gcccatgtgctctcacaaaaattggatgatgtggacccactggtgactaccaactttggc
aagataagagggattaagaaagaactcaataatgaaattttggggcctgttattcagttt
cttggagttccatatgcagctccaccaacaggggaacatcgttttcagcctccagaacca
ccatctccctggtcggatgtcaggaatgccacccagtttgctcctgtgtgtccccagaat
atcattgatggcagattgccagaagtcatgcttcctgtgtggtttactaataacttggat
gtggtttcctcgtatgtacaagaccagagtgaagactgcctatatttaaacatatatgtc
ccaactgaggatggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagatattcgggacagtggaggtcccaagccagtgatggtgtatatccat
ggtggctcatacatggaaggtactggaaacttatatgatgggagcgtgctggcaagctat
ggcaatgtgatcgtcatcactgtcaactatcggcttggggtacttggtttcttgagtaca
ggggatcaggccgcaaaaggaaactatggacttcttgatctcatacaggctttaagatgg
actagtgagaacattggattctttggtggtgatcccttaagaatcactgtttttggatca
ggcgctgggggttcatgtgtcaatctgctgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaacgagcaatagctcaaagtggaacagccctt
tccagctgggctgttagtttccaacctgcaaaatacgctagaatgttggccacaaaagtt
ggttgcaatgtttcagatacagtagagttagtggaatgcctccagaagaagccttacaaa
gaacttgtcgatcaagatattcagcctgccagataccacatagcctttggacctgtgata
gatggtgatgtcataccagatgaccctcagatattgatggagcaaggagagtttctcaac
tatgatataatgttaggagttaaccaaggggaagggttaaaatttgttgaaaatatagta
gatagtgatgatggtatatcagctagcgactttgactttgccgtttccaattttgttgac
aatttatacggctatcctgaaggcaaagatgttttaagagagaccattaaattcatgtac
actgactgggctgatcggcataaccctgaaaccagaaggaagacactgttggcattgttt
accgaccatcagtgggtggcaccagctgtcgccacagcagaccttcactcaaactttggt
tcacctacatacttctacgccttttaccatcattgccaaacagatcaggttccagcctgg
gctgatgcagcccatggagatgaggttccctatgtattgggaatccccatgattggcccc
acagagttatttccttgcaatttctccaaaaatgatgtgatgctgagtgcagtcgtaatg
acatactggacaaactttgctaaaactggtgaccccaatcaaccagtccctcaagacaca
aaatttatccataccaaacccaaccgatttgaagaagtagcatggaccagatattcccag
aaagatcaactttatctccatattggattaaaaccaagagttaaagagcattacagggcc
aataaggtgaacctctggttggagctggtacctcatctgcataatctcaatgacatttct
cagtatacctcgacaacaactaaagtgccatcaactgacatcactctcagacctacgaga
aaaaattctgttcctgtcacatcagcctttcccactgccaagcaggatgatcccaaacaa
caaccaagtccattttcagtggatcaaagggactactcaacagagctgagcgtcactatt
gcagtcggagcatcactgttgtttctgaacatcttggcctttgcagccctgtactacaaa
aaggataagaggagacatgatgtccacagaaggtgcagccctcagcgtactaccaccaac
gatctgacccatgcacaagaagaggaaatcatgtccctccaaatgaagcacactgatttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttcggaccgcctgcccccca
gattacacactagctatgagaaggtccccggatgatgttcccttaatgacacccaacacc
attacaatgattcccaacactataccaggaattcaacccttacacacattcaatacattt
actggaggacagaacaatactctgccccacccccacccccacccccattcacattcaaca
accagggtatag
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