Sciurus carolinensis (gray squirrel): 124992846
Help
Entry
124992846 CDS
T08117
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124992846
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
DSCAM family
124992846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
124992846
NCBI-ProteinID:
XP_047420097
LinkDB
All DBs
Position
9:complement(136457576..137123405)
Genome browser
AA seq
2011 aa
AA seq
DB search
MWILALSLFQSFANVLGEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPPSVEAYITVVSWEKDTVSLVSGSRFLITSTGA
LYIKDVQNEDGLYNYRCVTRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENTRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNV
RITGINRENLIMDHMVKSDGGAYQCFVRKDELSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLMCNVKGTPLPTITWTLDDDPILKGGGHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EAGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKDALNGILQGFRVIYWANLMDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKMLVTISCILLGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPAVLEPIPLEAPSSASTREGQSWQQGAVATLPQREGAELGQ
AAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggccctctccttgttccagagcttcgcgaatgtgttgggtgaagaaccc
cactccagcctctacttcgtcaatgcatctctgcaagaggtagtgttcgccagcacctcg
gggacgctggtgccctgcccggctgcaggaatccctcctgtgaccctcagatggtaccta
gcgacgggcgaggagatctacgacgtccctgggatccgccacgtccaccccaacggcacc
ctccagatcttccccttccctccttccagcttcagcaccttaatccatgacaatacttac
tattgcacagccgaaaatccttcagggaaaattagaagtcaggatgtccacatcaaggcc
gtcttacgggagccctacacagtccgtgtggaggaccagaaaaccatgagaggcaatgtc
gcggtcttcaagtgcattatccccccctccgtggaggcgtacatcactgtcgtctcctgg
gagaaggacaccgtttccctcgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaatgaagatggcctgtataactaccgctgcgtcacgcgg
cacagatacactggggagaccaggcagagcaacagtgcacgcctctttgtatcagaccca
gcgaactcggctccgtccatactggatgggtttgaccatcgcaaagccatggcggggcag
cgcgtggagctgccttgcaaagcgcttggacacccggagccagactaccgctggctgaag
gacaacatgcccctggaactctccggaaggttccagaagacagtgacggggttgctcatt
gagaacactcgcccctcagactcaggcagctacgtgtgcgaagtgtccaaccgatatggg
actgctaaggtgataggccgcctgtacgtgaaacagccactgaaagccaccatcagtccc
aggaaggtcaagagcagcgtggggagccaggtttccttgtcctgcagcgtgacagggact
gaggaccaggagctctcctggtaccgaaatggtgaaatcctcaaccctggcaaaaatgtg
aggatcacagggatcaaccgcgaaaaccttataatggatcacatggtcaaaagtgacggg
ggcgcataccagtgctttgtgcgcaaggatgagctgtccgctcaagactatgtgcaggtg
gtccttgaagatggaactcccaaaattatttctgcctttagtgaaaaagtggtgagtccc
gcagaaccagtgtccctcatgtgcaacgtgaaggggacacccttgcccaccatcacgtgg
acgctggacgacgacccgatcctcaagggcggcggccaccgcatcagccagatgatcacg
tccgaggggaacgtggtcagctacctgaacatctccagctcgcaggtccgcgacgggggc
gtctaccgctgcaccgccaacaactcggccggagtcgtcctgtaccaggctcgaataaac
gtaagagggcccgcaagcatccgacccatgaaaaatatcacagcgatcgccgggcgggac
acctacatccactgtcgcgtgatcggctacccgtactactccatcaagtggtacaagaac
tcgaacctgcttccttttaaccaccgccaggtggccttcgagaacaacgggacgctgaag
ctctcggacgtgcagaaggaggtggacgagggcgagtacacctgcaacgtgctggtccag
ccgcagctctccaccagccagagcgtgcacgtgaccgtgaaagttccaccttttatccaa
ccttttgagtttccaagattctccatcgggcagcgggtcttcatcccgtgtgtggtggtc
tcaggggacctacccatcaccatcacctggcagaaggacggccggcccatccccgccagc
ctgggcgtgaccatcgacaacatcgacttcaccagctccttgaggatctccaacctctcg
ctcatgcacaatgggaactacacctgcatagcccggaacgaggcggcggccgtggagcac
cagagccagctaatcgtcagagtccctcccaagtttgtggtgcagccgcgggaccaggac
gggatctacggcaaagctgtcatcctcaactgctcagccgagggttaccctgtccccacc
atcgtgtggaagttctcaaaaggtgctggggttccccagttccagcccattgccctgaac
ggccgaatccaggtgctcagcaacgggtcgctgttgatcaagcacgtggtggaggaagac
agcggctactacctctgcaaggtcagcaacgatgtgggcgcggacgtcagcaagtccatg
tacctcacggtcaaaattcccgcaatgataacatcctaccccaacaccacgctggccact
caggggcagaagaaggagatgagctgcacggcccatggcgagaagcccatcatcgtgcgc
tgggagaaggaggacaggatcatcaacccagaaatggcccggtacctcgtgtccaccaag
gaggcgggcgaggaggtgatttccactctgcagattttgccaactgtgagagaagattct
ggcttcttctcctgccatgcaatcaattcttatggggaggatcgtggaataattcagctc
acagtgcaagagcccccagaccctcccgaaattgagatcaaagatgtcaaagcacgcaca
attacgctcaggtggaccatggggtttgatggaaacagccccatcacgggctacgatatt
gaatgcaaaaataaatcagactcctgggattctgctcagagaaccaaagatgtttcccct
cagctgaactcggccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggattggcaagagcgagcccagcaacgagctcaccatcacagcggac
gaggcagctcctgacggtccacctcaggaagttcacctggagcccatatcatctcagagc
atcagggtcacctggaaggctcccaagaagcatttgcaaaacgggattatccgtggctac
caaataggttaccgcgagtacagcactgggggcaacttccagttcaacatcatcagtatc
gacaccacgggggacagcgaggtctacaccctggacaacctgaacaagttcacccagtac
ggcctggtagtgcaggcctgcaaccgggcgggcacgggaccctcttctcaggaaatcatc
accaccaccctcgaggacgtgcccagttacccccctgaaaatgtccaagccatagcaaca
tcgccagaaagcatctcaatctcctggtccacgctttccaaggacgccttgaatggaatt
ctccaggggttcagagtcatatactgggccaacctcatggatggagagctgggcgagatt
aagaatgtcaccaccacacagccgtccctggagctggacgggctggagaagtacaccaac
tacagcatccaggtgctggccttcacgcgcgcgggggacggggtcaggagcgagcagatc
ttcaccaggaccaaagaggacgttccaggtccgcccgcgggcgtgaaggcggctgcggcc
tcggcctccatggtcttcgtgtcctggcttccccctctcaagctgaacggcatcatccgg
aagtacacggtgttctgctcgcacccctatcccacagtgatcagcgagtttgaagcctcc
cctgactcgttttcctatagaatccctaacctgagtcggaatcgtcagtacagcgtctgg
gtggtggccgtgacctcggcgggaagaggcaacagcagtgagatcatcacagtggagccg
ttagccaaagctcctgcgagaatcttaaccttcagcggaacagtgaccactccctggatg
aaagacatcgtcttgccatgcaaagctgttggggacccttctcctgcagtaaaatggatg
aaagacagtaacgggacacccagcctggtcacgattgatgggcgcaggagcatcttcagc
aacgggagcttcatcatccgcacagtgaaagctgaagattccggctactacagctgcatt
gccaataacaactggggatcagatgaaattattttaaatttgcaagtacaagttccacca
gatcagcctcggcttacggtatccaaaaccacgtcttcctcgatcactctctcctggctg
cctggcgacaatgggggcagctccatcagagggtacattctgcagtattccgaggacaac
agcgagcagtgggggagcttccccatcagccccagcgagcgctcctaccgcctggaaaac
ctgaagtgtgggacttggtacaagttcactctgaccgcccaaaacggagtggggccgggg
cgcatcagcgagatcatagaagcaaaaacactgggcaaagagccgcagttctccaaggag
caggagctcttcgccagcatcaacaccacgcgcgtcaggctcaacctcattggctggaac
gacggcggctgccccatcacctccttcacgctggagtacaggcccttcgggaccacggtg
tggaccacagcgcagcggacctccctctccaagtcctacatcctgtacgacctgcaggaa
gccacctggtacgagctgcagatgcgggtgtgcaacagcgcgggctgcgccgagaagcag
gccaacttcgccacgctcaactacgacggcagtacaatccctccactcattaagtcggtt
gtacaaagtgaagaaggactgacaaccaacgaggggctcaagatgttggtgaccatctcc
tgcatcctgctgggggtcctactgctgtttgtcctgctgctggtcgtgcggaggaggcgg
cgggaacagaggctaaagaggctgagagatgcgaagagtttggctgaaatgcttatgagt
aagaatactcggacgtcagacaccttaagcaagcaacagcagaccctaagaatgcacatc
gacatacccagggctcagctgctgattgaggagagagacacaatggagaccattgacgat
cgctccacagtcctgttgaccgatgctgattttggagaagcagctaaacagaagtccctg
acggtgactcacacagtccattaccaatcagtgtctcaggccaccgggcccttggtggac
gtttcagatgctcggccgggaacaaatcccaccaccaggaggagcgcaaaggctgggccc
acggcgaggaaccggtacgccagccagtggaccctcaacaggccccaccccaccatctca
gcacacaccctcaccacagactggaggctgcccacgcccagggccacgggctccgtggac
aaggagagcgacagttacagcgtcagcccctcgcaagacacagatcgagcaagaagcagc
atggtctccacagaaagtgcctcctccacttacgaggaactggccagggcctacgaacac
gccaagatggaagagcagctgaggcacgccaagttcaccatcaccgaatgcttcatctca
gacacgtcatccgaacagttgacggcagggacaaacgagtacacggacagtctgacctcc
agcaccccttcggaatcggggatctgcaggttcactgcgtctccccccaaacctcaggat
ggaggacgggtgatgaacatggccgtcccgaaggcccatcggccaggtgacctcatacat
ttgcctccataccttagaatggacttcttgttgaaccgaggggcgccaggcaccagcagg
gacctgagtttaggacaagcgtgcttggagcctcagaaaagcaggaccctcaagcgccct
gccgtcctggaacccatccccctggaggctccctcctcggcctccacgagagaaggacag
tcgtggcagcagggggccgtggccacgttacctcagcgagaaggggcagagctaggacag
gcagccaagatgagcagctcccaggaatctctgctcgactctcggggccatttgaaagga
aacaatccctacgcgaaatcctacaccctggtataa
DBGET
integrated database retrieval system
