Sciurus carolinensis (gray squirrel): 124992871
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Entry
124992871 CDS
T08117
Name
(RefSeq) ATP-binding cassette sub-family F member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ncar03012
]
124992871
Translation factors [BR:
ncar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124992871
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_16
NACHT
AAA_29
AAA
MMR_HSR1
RsgA_GTPase
AAA_15
DUF429
DUF87
DUF1672
Dynamin_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
124992871
NCBI-ProteinID:
XP_047420142
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All DBs
Position
9:54385177..54393044
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AA seq
709 aa
AA seq
DB search
MATCAEILRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDAG
IRAVCQRMYNTLRLAEPQSQGSSQVLLDAPIQLSKITENYDCDTKLPGLLKREQSSTVNA
KKLEKAEARLKAKQEKRSEKDTLKTSNPLVLEEASASQAGSRKESRLESSGKNKSYDVRI
ENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVE
QEVAGDDTPALQSVLESDSVREDLLQRERKLSAQIAAGRAEGSEAAQLAEIYAKLEEIEA
DKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDV
RAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERL
LNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLEKLPELKPVDKESEVVMKF
PDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLMG
DLSPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGIS
GELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGV
ILVSHDERFIRLVCRELWVCEGGGVTRVEGGFDQYRALLQEQFRREGFL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttgcgccgaaatcttgaggagcgagttcccagaaattgacggacaggtcttc
gactacgtgaccggagtcttgcacagcggcagcgcggacttcgagtctgtggatgacttg
gtagaagctgtgggagaactattgcaagaggtttctggggacagcaaggatgacgcgggc
atcagggctgtgtgccaacgcatgtacaacactctgcgcctggctgagccacagagccag
ggaagtagccaggtgctactggacgcccctatccagttgtcaaagataacagaaaactac
gactgtgacaccaaacttccaggactgctaaagagggaacagtcctcgacggtgaatgca
aagaagcttgaaaaggctgaggcccgactgaaggcaaagcaggagaagcgctcagagaag
gacaccctgaagaccagcaaccctctagtcttggaagaggcatcagccagccaggcaggc
agcagaaaggagagtcggttggaatcatctggcaagaacaagtcctatgatgtgcgaatt
gagaactttgatgtgtcttttggtgatagggtactcctggctggggcagatgtgaacctg
gcatggggccgccgatatgggctggtgggacggaatgggctagggaagactacactgctg
aagatgctggccacccggagcttgcgagtgccagcccacatttccctgctacacgtagag
caggaggttgctggagatgacacccctgccctgcagagtgtactggagagtgatagtgtg
agagaggacctgctacagcgggaacgcaagctcagtgcccagattgccgctggcagggca
gaaggttcagaagctgcacagctggctgaaatctatgccaaattggaggagattgaggct
gacaaggcacctgccagggcctcagtcattcttgctggacttggctttacccctaaaatg
cagcagcagcccacccgggagttctcaggtggctggagaatgagactggccttggcccgg
gctctgtttgctaggccagatcttctgctgttagatgaacccacaaacatgctggatgta
agggccatcctgtggctggagaattatctgcagacatggccctccacaatcctagtcgtc
tctcacgaccgcaacttcctgaatgccattgccacagacatcatccacttgcacagccag
cggctagatggttatcggggagactttgagaccttcatcaagagcaagcaggagcggctg
cttaatcagcagcgtgaatatgaggcacagcagcagtatcgccagcatatccaggttttc
attgaccggtttcgctacaatgccaatcgggcctctcaagtgcagagtaaactcaagatg
ctggagaagctacctgagctgaagcctgtggacaaagaatctgaggttgtgatgaaattc
cctgatgggtttgaaaagttctcaccaccaattctgcagctagatgaagtggatttctac
tatgatcctaagcacgtcatcttcagtcgtctgtctgtctcagctgatcttgagtcccgc
atatgtgtggttggggagaatggggctgggaagtctaccatgctgaagctgcttatgggg
gacctgtcacctgttcgaggcatcagacatgcccacaggaatctgaagattggctatttt
agccagcaccatgtggagcagctggacctgaatgtcagtgctgtggagctgttggcacgc
aagtttcctgggcgacccgaggaggaatatcgtcaccagttgggccggtatggcatctct
ggagaactggctatgcgtcctgttgcaagcttgtctgggggccagaagagccgggtggcc
tttgctcagatgaccatgccctgtcccaacttctacattctggatgaacccacaaaccac
ctggacatggagaccattgaggctctgggccgtgctcttaataatttcaggggtggtgtg
attctggtgtcccatgatgaacgcttcatccgactggtgtgccgggagttgtgggtgtgc
gaaggaggtggcgtcacccgagtcgaggggggatttgaccagtatcgagccctcctccag
gaacagttccgccgtgagggctttctttag
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