Sciurus carolinensis (gray squirrel): 124992885
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Entry
124992885 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: very large A-kinase anchor protein-like
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124992885
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124992885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
IL4_i_Ig
RicinB_lectin_2
CarD_C
Motif
Other DBs
NCBI-GeneID:
124992885
NCBI-ProteinID:
XP_047420169
LinkDB
All DBs
Position
9:complement(96088716..96189916)
Genome browser
AA seq
2945 aa
AA seq
DB search
MSGGRRRGSAPWHSFSRFFAPRSPSRDKEEEEEEKPGTSQPPAPGAASVENEPMSTSHKK
ENVLSSDSVKIHQSEEKINHAEKLITLPTQEDPKKANDLSGSTSDTKTGETDRQPKESFF
QFLGNLFNISGKSSLGESKQSSFKDDHDKNEKDSQTHGDSHEEGIQREREIFSGPLGPQA
LPTEEQESISPELSDTFSLDTTQDSEQETTDLLKKIEGKPERPAVTYATYRGPRQIRKYL
KQQTILETLNTLDRENDSSDSSTNTHTGPGSEVEAGRAPLSSASTDVHMKGCLFGGPLED
SDCSTINLKTESHLTNCPELQNITLSKDVLNKNDPGGPERSRLSSSETNPGPMVGESDSQ
NHLGCVPVSQTDRNLVCSALFTGSKSSKVPCSPEFQRKTSTENRRENSSVTNDNGTLEQR
EEHVEPQGPAVSDFSGSKSNGGDTTKLESTNSPSLSKSVRHENLQLPEKKCSNKQSVDNS
SKQAAHHTRTIAVQGHAVTDTEPVKERKKLFFQDSQKNLAVSEIRQEIASVSAGEPTHSS
HIKASEDRIESLPKDTDQLFKTKAKKPDFGPHDKAYIMSINPKDPAFAQFISESTVVTCL
ENRLAPEMNFRLNKSCISESPLHAKELQQAKVSPDDETPLTLNYKKSHFNASPPTFVSGT
DIPNKLHIPVLKDVPIETGDSNIVGISHQPTKCPEENVETHVEAIDRKSPPPLHLDHESA
APESKDIFADSVEYRFHPGPEMSGPHLTVADPLNSEPGSLFKDYSFVSSPDLNKTELKPE
NTKASKNTIKKSDSLSLETKIDNIAKTLSTAEVGSQNSVPVESHSGRGKSVALSKVSVSQ
TESKDISQGTISSLLEIPEEPAKPVLSELSSVEVEQDKSFQSMDHREFKDKCSDAGLKDN
HQTEVSSASKHQGIQETEVDTLGDSPPLPQSNLPGISPPGQDEEVTRHMTQNCESNTYMI
HESLNICGTKRXSGFSEMAELSLTSISPKFQETDSTKVNTPFLSSDTSVEKNVFSSEYSN
SFNETLVLRSERKASSHGKREEAHFPSGGTDSASFSSGQPEEVSMVINSHDPSNSYDSVK
RTIDLSGESASITNLLDPSSFYLELETPIPTGADVAPFQDHFGIHTGKASLDFPTTAQFD
NTMEAETGAVAGVPTSVNSSSQQCSEASAEHVEAGRRAHDQLLDLKSGLLRKAETLIGEI
FNSVREELTSKHTVGTCQEHISIYGVMNPGTLKEDIPEKKESEVALAGIQLKECLEEQGM
ENMSEVKEEEKACVSTAVGETHLLFDSDRVNVSCVLEDQARKLVNEVIYSAQENLKNDDF
EDTEDTWDSEPQANTSKILNSDSVKPSDVVRKLLLSEQAVNQSTCEISENKVLSRFFSIS
NLLSGTEPIKGREIVLHQKSPLSRNEAGQSDSIHLQESDTVLLSEDMPHKGLDDRVKTNL
FVNEDYRETSETEYVDSHKTETEDTRTLALNFKWPLSVSDDIHTPGTSKSSLSDSLVCIS
EKSLPEHSKSTPLAMAEIGKAHKKDEVNVGKIELVPSILEMGETNKRDTELNIMKCEVVP
PVLDAERAHKMEAELNITKIEPEAEIFKMGEAYPVDAERYVEKPEGLPVTVEMDSACKMK
NTEGDVGKTEVMPLMSEVKNSHQKDAEXDIVKTEVTPAAREVENIYQKHAEGDVGKTGVT
AVVSEVEDTYQKGGEGIAEKDEVTPLTLEMRGIYQKDTERDVDETEAKPVLLEVINIYQK
DAGGVTEKTERPVLEMETTHQKVASEVLGNTEMVPSVLEVKEAHKKAAAASLEMGKTSER
DAEETNGRNMSMTSKLETAITSPEDPSETLVKHKEMSAAIDTEKIRETEVELTITQVKAV
PPVFETGKAFQEFAERSAGEVEEEPAEIKENLILHDSRLASHFRGYQSPTLSKDYEGYPA
LAMPDFQPEDPVVRLNKRVSITAVYDRRRDLDYSDGKEESNLAFVSQDEQENSSFTILYE
EPLQEEDKYTSAEVRETCSVLFPNMASACMPVLACERSESRTDLVHNLEKDTRLGETFDG
DSSEMFLSVEAKRYKIYPLALSPIYEDDSSQEDILSSEVSPGHHGSTKSRESANQSSSVL
SLLQSVSERLKMNFDEDDREVAEEEEEEEEAMQRGGLRAQRKDHVTFQLTDPSIVCYPDN
DQESTGLSKNSYVMSSDPATSNLQIGLWPEKASFLQKSDLTSKLHSSLKSAYHQYLQTSK
THSSEKGTRFGGCFQEPVSKYFRVQDNPGRLGPYVENVDRQTLRCNPRPGKMVIYDLHGS
KYKQEIYCNIPDATEWSFPNGVLIKVVRGCWILYEKPHFQGQKCVLEEGETILNRDWILQ
NRKHPQRNFVLGSIKRVLKDCSIPEIELCPQSDTACCPIYIQRAVPNLEELNIPKSVSFT
VNSGVWLAYPDINFKGQATVLEEDHGLFEISAAEMKSLLPLQMGGLKVEMPMNLKVIIYE
KPHFLGQAKDFSEHIDSVPNFLKSDEDFQGIGSIRVIGGVWVAYEKEHFKGQQFLLEEGD
FEDSNACGALSGPILSFRYLQANFIESSITLFESDLESGKFIDITNQEISDLEDIGFGSE
TRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSDNIIMSIRPIQLEPLGINEP
PHLLKAFSKPGFQGECVDFIKESSDLTSFTPCSFKVLRGCWLLYYQEGIFYNQCVLEEGL
YADLTSCGCLTSTVKSLKPIDYIFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYT
QSVWVKSGLWIAYEGSNFLGRQILLDPIEIPNWTAFSRWKTIGSLRPMKQPAVYIRIKNR
AQDEYLTVTGNLADTRAMSVCISPYSGKNTQIWYYCRGLFKSKASDTCLDVIGGRDTPGA
KVALWTEHGQFRQKWRLNKNGTISSYLSDQLVLDVKGGNYCDKTHVIVNQPLEGEETQKW
DIEIL
NT seq
8838 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtggccggaggaggggcagcgccccctggcacagcttctcccggttcttcgct
ccccggagcccttcccgggacaaggaagaggaagaggaggagaagcctgggaccagccag
ccgcccgccccgggcgctgccagtgtcgaaaatgagcccatgagcacaagtcataaaaag
gaaaatgtactttcatcagactcagtaaagattcatcaaagtgaggagaaaataaaccat
gctgagaaactgatcactcttccaacacaggaagatcccaaaaaggcaaatgatctttct
ggttccacctcagataccaaaacaggggaaactgatcgacaaccaaaggagagctttttt
cagtttcttggtaacttgttcaatatctcaggaaaatcatctcttggcgaatctaagcag
tcctctttcaaagatgaccatgataaaaatgaaaaagactctcagactcatggtgacagt
cacgaggaagggatccaaagggagagggaaattttcagtggcccactgggaccccaggca
cttccaacagaagaacaagagtctatctcccctgaactctcagataccttttctttggat
acaacgcaggacagtgaacaggaaaccaccgatttgttgaaaaaaattgaaggtaagcca
gagaggcctgcagtaacatatgccacgtatcgaggccccagacaaattaggaaatattta
aagcaacagaccattttggaaactctgaatactttagacagagaaaatgacagttctgac
tctagtacaaacactcacactggccctggaagtgaagtggaggctgggagagcaccgctg
tcatcagctagcacagatgtccacatgaaaggatgtctgtttggaggcccattggaagac
tctgattgtagcacaattaatctcaaaacagaaagtcatctgacgaactgtccagaactt
cagaatatcactttgtctaaggatgttttaaataaaaatgatcccggaggacctgagaga
agtcggttatcctcttccgagactaaccctggccctatggttggagagtctgactcacag
aatcatttaggttgtgtgccagtttctcaaactgacagaaatttggtatgttcagcattg
tttacaggaagtaagagcagcaaagttccttgcagtccagaatttcagaggaaaacttca
acagaaaataggagagaaaacagctctgtgacaaatgataatgggacattggagcaaaga
gaggagcatgttgaacctcagggacctgctgtttctgatttttctggtagtaaatctaat
gggggtgacactaccaaactggaaagtacaaattcgccaagtctcagtaaatcagttagg
catgaaaacttgcagttgccagagaaaaagtgttctaacaagcaaagtgtagataactca
tcaaagcaggctgcccatcacaccagaaccattgctgtccagggacatgctgtgacagac
acagaacctgtaaaggaaagaaagaagttgtttttccaagactcacagaaaaatttggct
gtttcagaaatcaggcaagaaatagcaagtgtctctgctggtgagcccacacattcaagt
catataaaagcttcagaagacagaattgagtcattacccaaagatactgaccagttgttt
aaaacaaaagccaaaaagcctgattttgggccacatgacaaagcttatattatgagtata
aatccaaaagaccctgccttcgcacagtttatcagtgaatcaacagttgtaacatgctta
gaaaatagactagcacctgaaatgaatttcagacttaataaaagttgcatttcagaatct
cctcttcatgccaaggaactccaacaagccaaagtatcgcctgatgatgaaacaccactt
acccttaactataagaaatcacattttaatgcttcacctcctacctttgtttctggaaca
gacattccaaacaagttgcatatacctgttttaaaggatgtgcccatagaaactggagat
tccaacattgttggtatttctcatcagccaactaagtgcccagaagaaaatgtggaaact
catgttgaggctatagacaggaagagtcctcctccccttcaccttgatcatgaatctgca
gctcctgaatccaaggacatttttgctgatagtgtagaataccggtttcatccaggtcct
gaaatgagtggacctcacttaactgtggcagacccattgaactctgaacctggaagcctc
ttcaaggattatagttttgtttcatctccagaccttaataaaacagagttaaagcctgaa
aacaccaaagcaagtaaaaacacaataaagaagtctgattctctttccttggaaaccaaa
attgataacattgctaaaactttatcaactgctgaggttggtagtcagaacagtgttcct
gttgagtcacattctggaagaggaaaatctgtagccttgtccaaggtatctgtttcccaa
acagagtccaaagacatttctcagggtacaatttcttccctattagaaattccagaagag
ccggcaaagcctgttttatcagagttaagttctgtagaggttgagcaggacaaaagtttt
caatcaatggatcatagggaatttaaagacaaatgttcagatgctggccttaaggacaat
caccagactgaggtttcttctgcctctaaacatcagggcatacaagaaacagaggtggac
accttaggtgattctcctcctcttccccaaagtaatctacctgggatttcacctcctggt
caagatgaggaagtcactaggcatatgacacagaattgtgaatccaacacttatatgatt
catgaatctttgaatatttgtgggacaaaaagangttctggtttctcagaaatggcagaa
ctcagtttaactagtatttccccaaagttccaagaaactgacagcacaaaagtaaataca
ccttttttgagttctgatactagtgtggaaaaaaatgtgttttcatctgagtattcaaac
tcgtttaatgaaactttggtgttgagatcagaaaggaaagcctcatctcatggaaagaga
gaggaagctcattttccgagtggtggtactgacagtgcatccttttcttctggtcagcca
gaggaagttagcatggttataaattcacatgatccctcaaatagttatgattctgtgaaa
cgtactatagatctctcaggtgaaagtgcctccataactaatctgctggaccctagtagc
ttttacttagaattggagacacctatcccaacaggggcagatgtagccccatttcaggac
cattttgggattcatactggaaaggcttctcttgatttcccaaccactgcccaatttgac
aataccatggaagcagagactggagcagttgctggggtcccaacgtcagttaacagctca
agccagcagtgttctgaagcctctgctgagcatgtagaagcggggagaagagcacatgac
caacttttggacctcaaaagtggtttactcagaaaggctgaaacattgattggggagatt
tttaattctgtcagagaagaactaacatccaaacacacagttggtacctgccaggagcat
atatccatatatggtgtaatgaatcccggtactctgaaggaagatatccctgagaaaaaa
gaatcagaagtggcattagcagggatccaactaaaggagtgtttggaagagcagggcatg
gaaaacatgtcagaagtcaaagaggaagagaaagcctgtgtttcaactgcagttggtgag
acacatctcctttttgattctgatagagtgaatgtatcttgtgtgttagaagatcaagct
agaaaattagtcaatgaggttatttattcagcccaagagaatttgaaaaatgatgatttt
gaagatactgaggatacctgggattctgaacctcaggctaatacttcaaaaattctgaac
agtgatagtgttaagccaagtgatgtagttaggaagttgttgttatcagaacaggcagta
aatcaaagcacatgtgaaattagtgaaaataaagtattaagtagattcttctccataagt
aacttacttagtggcacagagccaattaaaggaagagaaattgtacttcaccaaaaatct
ccactttctagaaatgaagctggacagtctgatagtatacatttgcaagaatcagatact
gttttactctctgaagacatgccccataaaggattagatgatagggtaaaaacaaattta
tttgtcaatgaggactatagagagacatcagaaacagagtatgtggatagtcacaaaact
gagacggaagatacaagaactcttgcactaaatttcaaatggcctctgtctgtgagtgat
gacattcacacacctggcacatccaaaagcagtttgtctgacagtcttgtgtgtatatct
gaaaaaagcttgccagaacatagtaaaagcacaccccttgcaatggcagaaatagggaaa
gcacataaaaaggatgaagtaaatgtgggaaaaattgagcttgtaccttccatattagaa
atgggggaaacaaacaagagggatactgaattaaatattatgaaatgtgaggtagtccct
cctgtgttagatgcagaaagagcacataaaatggaagctgaattaaatatcacaaaaatt
gagccggaagctgaaatttttaaaatgggagaagcatatccagtggatgcggagaggtat
gttgaaaaacctgagggattacctgtcactgtagaaatggattcagcttgcaagatgaag
aatactgaaggggacgttggcaaaactgaggtgatgcctcttatgtcagaagtgaaaaat
agccaccaaaaagatgctgaangggatatagtaaagactgaggtgacacctgctgcaaga
gaagtggaaaatatttatcaaaagcatgcagaaggggatgttggcaagactggagtgaca
gctgttgtgtcagaagtggaagatacctaccaaaaaggtggcgaggggattgctgaaaag
gatgaggtgacacctcttacattagaaatgagaggtatttaccagaaggatactgaaaga
gatgttgatgaaacggaagcaaaacctgttctgctagaagtcataaatatttaccaaaaa
gatgctggaggagtaactgaaaagactgagaggcctgtgttggaaatggaaaccactcac
caaaaggttgcttcagaggttttggggaatactgaaatggtaccttctgtgttagaagtg
aaagaagcacacaagaaagcagcagctgcctccttagagatggggaaaacctccgagaga
gatgctgaagagactaatggaagaaatatgtccatgacttctaaactagaaacggcaata
acatccccagaagatcctagtgagactcttgtgaaacataaagaaatgtcggcagccata
gatacagagaaaatacgtgaaacagaagtggaattgaccattacacaagtgaaggccgtg
cctcctgtatttgaaactggaaaagcatttcaagagtttgctgagaggagtgctggagaa
gtggaggaagagcctgctgaaataaaggaaaacttgatattgcatgatagcagacttgcc
tcacacttcaggggatatcaatcacctacattaagtaaggattacgagggttacccggcc
ttagcaatgccagattttcaacctgaggaccctgtagtaaggctcaacaaaagagtgtcc
atcactgcagtgtatgacagaagaagagatctggattatagtgatgggaaggaagaatct
aatttagcctttgtttctcaggatgaacaagaaaattcttcctttactatattatatgaa
gagccccttcaagaggaagacaagtatacctctgcagaagttagagaaacatgctctgtc
ttatttcccaacatggcttctgcctgcatgcctgttttggcatgtgaaaggtctgagagt
agaactgacctcgtccataaccttgaaaaagatacaagattaggtgagacatttgatggt
gacagttcagaaatgttcttatcagtagaggccaaaaggtacaaaatttatcccttagct
ttgagccccatttatgaggatgacagctcacaggaggacattctatccagcgaggtctcc
cctggtcatcacggctccaccaaatccagagagagtgcaaaccagtcctcttcggtcttg
tcgcttctccagtcggtatcagagcgtttaaagatgaattttgatgaagacgatagagag
gtggctgaggaagaagaggaggaggaagaagcaatgcagagaggaggcctgagagctcaa
aggaaggatcatgttaccttccagttgacagatccttccatcgtatgctaccctgacaat
gaccaggaaagcactggactttctaagaattcatatgtaatgtcaagtgaccctgctacc
tccaatctgcagattggtctgtggccagaaaaagcttcatttctacagaaatccgacctt
acttctaaactgcattcttctttaaagagtgcttatcatcaatatttacagacatctaaa
actcattcctcagaaaaaggaaccagatttggtgggtgttttcaggaacctgtgtcaaag
tattttcgtgttcaagacaatccaggcagattgggcccatacgttgagaatgttgacagg
caaactctgagatgtaacccaaggcctgggaagatggttatctatgatctccatggaagc
aaatataaacaagagatctactgtaatattcctgatgctacagaatggtcttttccaaat
ggggtactgataaaagttgtaagaggctgttggatattatatgagaaaccacatttccaa
ggtcagaaatgtgtgttagaagaaggggaaacaatattaaatcgagactggattcttcag
aacagaaagcatccacaaagaaactttgtattgggttctatcaaacgtgtcttaaaggat
tgcagcattccagagatagagctttgcccacagtctgacacagcttgttgccctatctat
atacagcgagcagtccccaatttggaagaactgaatatccccaaatcagtgtctttcact
gtgaattcgggagtttggcttgcctacccagatattaattttaaaggtcaagctacagtt
ttggaggaagaccatgggctgtttgagatttctgcagcagaaatgaaatcattgcttcca
cttcaaatgggtggactgaaagtggaaatgcctatgaacttaaaagttattatttatgaa
aaacctcacttccttggacaggccaaagactttagtgaacatattgattctgtccctaat
tttttaaaaagtgatgaggactttcaagggattggatcaattcgtgtcattggtggagtg
tgggtcgcatatgaaaaagaacattttaaaggccaacaatttctgcttgaagaaggagac
tttgaagatagtaatgcttgcggggcattaagtggccccatcttgtctttccggtactta
caagctaattttatagaatcttccatcacactgtttgaatctgacctagaaagtgggaag
tttattgacattacaaatcaggaaatatctgacttggaagacattggctttggcagtgaa
acaagatccattcatgtcaaaagtggagtatgggttgcctaccagcagaagttcttctgt
ggagagcaatacattttagagaaagggaaatacaaatgcttttttgactggggaggatca
gataatataatcatgtcaatcagacctatccagctggaaccacttgggataaacgagcct
ccacatttgctcaaagcattcagtaaaccagggttccaaggtgaatgtgtagattttata
aaagaaagttctgacttgacttcattcacaccatgttcttttaaagttcttcggggttgc
tggctcctgtattaccaagagggcattttttataatcagtgtgtgttggaagaaggccta
tatgctgaccttacttcctgtggctgtctaacatctacagtcaaatccctcaagcccatt
gactatatttttgaagaaccctccatcagcctttttgctctggaacattgtgagggaaga
gagttacatcttgaagaggctgtgaactctgttttgaacaaggacctgcacttctatacc
cagtctgtgtgggtaaaaagtggactttggatagcttatgaaggatccaacttcctggga
agacaaattctacttgatcctattgagattccaaattggacagcattcagtagatggaaa
accattggttccctccgtcctatgaagcagcctgcagtgtacatcaggataaagaaccga
gcccaggatgaatatctaacagtcactggaaatttagctgacacaagggcaatgtctgtg
tgcatctctccctacagtggaaagaatactcagatctggtattactgtcgaggacttttt
aaatccaaggccagtgatacgtgtcttgatgtgattggtggccgggacacacctggagct
aaggtagccctatggactgaacatggacagttcagacaaaagtggagactgaataaaaat
ggaaccatcagttcttatctcagtgatcaacttgtccttgatgttaaaggaggaaactat
tgtgacaagactcatgtcattgtaaatcagcccctggagggagaagaaacacagaaatgg
gacattgaaatactgtga
DBGET
integrated database retrieval system
