Sciurus carolinensis (gray squirrel): 124992935
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Entry
124992935 CDS
T08117
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124992935
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124992935
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124992935
Peptidases and inhibitors [BR:
ncar01002
]
Serine peptidases
Family S54: Rhomboid family
124992935
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
124992935
Mitophagy factors
Parkin-dependent mechanism factors
124992935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Caps_synth_CapC
Motif
Other DBs
NCBI-GeneID:
124992935
NCBI-ProteinID:
XP_047420288
EnsemblRapid:
ENSSCRG00010020589
LinkDB
All DBs
Position
9:complement(54081539..54125835)
Genome browser
AA seq
379 aa
AA seq
DB search
MAWRGWAQRGWGCGQAWAPPGVGHSCEELTAALAAPRLLGRRFNFFIQQKCGFRKAPRKV
EPRRSDTGSSGEAYKRSALIPPVEETVFYPSPYPIRTLIKPFFFTVGFTGCAFGSAAIWQ
YESLKSRVQSYFDGIKADWLDSIRPQKEGDLRKEINKWWNNLSDGQRTVTGIIAANVLVF
CLWRVPSLQRTMMRYFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNIL
GQEQFMAVYLSAGVISNFVSYMCKVATGRYGPSLGASGAIMSVLAAVCTKIPEGRLAIIF
LPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIWYITYGHELIWKNREPL
VKIWHEMRTDGPKKGGGSK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcgaggctgggcacagagaggctggggttgcggccaggcttgggctccgccg
ggggttggccacagctgcgaggagctcactgctgccctggccgcgccgcggctgctcgga
cgcaggtttaacttctttattcagcaaaaatgtggattcagaaaagctcctcggaaggtt
gaacctcgaagatcagacacaggatcaagtggcgaagcatacaagagaagtgctttgatc
cctccagtagaagaaacagtcttttatccttctccctatcctataaggactctcataaaa
ccttttttttttactgttgggtttacaggctgtgcatttggatcagctgctatttggcaa
tatgaatcactgaagtccagggtccagagttattttgatggtataaaagctgattggttg
gatagcataagaccacaaaaagaaggagacctcagaaaggagattaacaagtggtggaat
aacctaagtgatggccaacggactgtgacaggtatcatagctgcaaatgtccttgtattc
tgtttatggagagtaccttctctgcagcgaacaatgatgagatacttcacatccaatccg
gcctcaaaggtcctttgttctccaatgttgctgtcaacattcagtcatttctccttattc
cacatggcagcaaatatgtatgttttgtggagcttttcttccagcatagtgaatattctg
ggtcaagagcagttcatggcagtgtacctatctgcaggtgttatttccaactttgtcagt
tatatgtgtaaagttgccacaggaagatatggaccttcacttggtgcatcaggtgcgatc
atgagtgtgttggcggccgtctgcactaagatccccgaggggaggcttgccatcatcttc
ctcccagtgttcacattcacggcagggaacgccctaaaagccattattgccatggataca
gctggaatgatcctgggatggaaattttttgatcatgccgcacatcttgggggagctctc
tttggcatatggtatattacttatggtcatgaactcatttggaagaacagggagcctcta
gtgaaaatctggcatgaaatgaggactgatggccccaaaaaaggaggtggctctaagtaa
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