Sciurus carolinensis (gray squirrel): 124992954
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Entry
124992954 CDS
T08117
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124992954
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
124992954
Condensin II
124992954
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
124992954
NCBI-ProteinID:
XP_047420317
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Position
9:31156592..31188375
Genome browser
AA seq
1287 aa
AA seq
DB search
MPRKGTQPSTARRKEEGPPLSPDGTSSDAEPDPPTGRTESQTAAPETPGEELDNRSLEEI
LNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSN
VIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDILSCTVEVHFQKIIDKEGDDYEVVPNS
NFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPK
GQTEHDEGMLEYLEDIIGCGRLNEPIKILCRRVEILNEHRGEKLNRVKMVEKEKDALEGE
KNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKINEDIKEINEKSNILSNE
MKAKNKAVKDVEKKLNKITKFIEENKEKFTQLDLEDVQFREKLKHATSKAKKLEKQLQKD
KEKVEEFKSIPAKSKNVITETTTRSNSLEKEKEKEEKKLKEVMDSLKQETQGLQKEKESR
EKELMGFNKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKAKEALTAASETLKERKAAI
GDIEAKLPQTEQELKEKEKELQKLAQEEINLKSLVHGLFQKVEEAKSSVAVNRSRGKVLD
AIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAVSSCCHALDYIVVDSIDTAQECVNFLKRQ
NIGVATFIGLDKMAIWAKKMTKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVADNL
DQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVMEISEEEINKMES
QLQRDSRKALQIQEQKVQLEEAVVRLRHNEREMRNTLEKFTASIQRLSEQEEYLSVQVKE
LEANVLATAPDKKKQKLLEENISAFKTEYDDVAEKAGKVEAEVKRLHNIIVEINNHKLQA
QQDKLDKINKQLDECASVITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVSDLTAE
LKSLDDKATEVINNTKAAENSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQI
DGHIAEHNSKIKYWQKEISKISLHPVEDNPVEEVSFLSREDLEAIKNPDSITNQIALLEA
QCHEMKPNLGAIAEYKKKEELYLQRVAELDRITSERDSFRQAYEDLRKQRLNEFMAGFYI
ITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSL
ALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDR
LIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaaaggcacccagccctccacagcccgccgtaaagaggaagggccgccgctg
tccccggacggcaccagcagcgacgcggaacccgatccgccgaccggccgcaccgagagc
caaactgcagccccagagactccaggtgaggaacttgataacagaagtttagaagagatt
ttgaacagtattcctccacccccacctccagcaatgaccaatgaagctggagctcctcgg
cttatgataactcatattgtaaaccagaacttcaagtcttatgctggggaaaaaattctg
ggacctttccataagcgtttttcctgtattattgggccaaatggcagtggtaaatccaat
gttattgattctatgctttttgtatttggctatcgagcacaaaaaataagatcgaaaaaa
ctatcagtactaatacataattctgatgaacacaaggatattctgagttgtactgtagaa
gttcattttcaaaagataattgataaggaaggggatgattatgaagtcgttcctaacagt
aatttctatgtatccagaacagcctacagagataatacttctgtctatcacataagtggg
aagaaaaagacatttaaagatgttggaaacctccttcgaagtcatggaattgacttggac
cataataggtttttaatcttacagggtgaagttgaacaaattgctatgatgaaaccaaaa
ggacagactgaacatgatgagggtatgcttgaatatttagaagatataattggttgtgga
cggctaaatgaacctattaaaattttgtgtcggagagttgaaatattaaatgaacataga
ggagagaagttaaacagagttaaaatggtggaaaaggaaaaggatgccttagaaggagag
aaaaacatagccattgaatttcttaccttggaaaacgaaatatttagaaaaaagaatcat
gtttgtcaatattatatttatgatctgcagaaacgaattgctgaaatggaaactcaaaaa
gaaaaaattaatgaagatatcaaagaaattaatgagaagagcaatatactgtcgaatgaa
atgaaagctaagaataaagcagtaaaagatgtagagaagaaactgaataaaatcacaaaa
tttattgaagagaataaagaaaaatttacacaactggatttggaagatgttcaatttagg
gaaaaactaaaacatgccacaagtaaagccaaaaaactggagaaacaacttcaaaaagat
aaagaaaaggttgaagaatttaaaagtatacctgccaagagtaaaaatgtcataactgag
acaacaactagaagtaattcccttgagaaggaaaaagaaaaagaagaaaaaaagttaaag
gaagttatggatagccttaaacaggaaacacaaggacttcagaaagaaaaagaaagtcga
gagaaagaacttatgggtttcaacaaatcagtaaatgaagcacgttcaaagatggatgta
gcccagtcagaactcgatatctatctcagtcgtcataatactgcagtgtctcagttaagt
aaagcaaaagaagctctaactgcagcttctgagactctcaaagaaaggaaagctgcaatt
ggagatatagaggcaaaacttcctcaaactgaacaagaattaaaggagaaagaaaaagaa
cttcaaaaacttgcacaagaagaaataaacctcaaaagtttggttcatggtctttttcaa
aaagttgaagaagcaaagagttccgtagcagtgaatcgaagtagggggaaggtccttgat
gcaataattcaagaaaaaaaatctggcaggattccaggaatatatggacgattgggggac
ttaggagccattgatgaaaagtacgacgttgctgtttcatcctgttgtcatgcattagat
tacattgttgttgattctattgacacagcccaagaatgtgtaaacttccttaaaagacaa
aatattggagttgcaacttttataggtttagacaagatggcaatatgggcaaaaaaaatg
actaaaattcaaactcctgaaaatactcctcgattatttgatttagttaaagtgaaaaac
gaggaaatccgccaagctttttactttgctttaagagatacattggtagctgacaacttg
gaccaagccacaagagtagcatatcaaaaagatagaagatggagagtggtaacattacag
gggcaaatcatagaacagtcaggtacaatgacaggtggtggaagcaaagtaatgaaagga
agaatgggttcatcagtggtcatggaaatctctgaagaagagataaataaaatggagtca
caattgcaaagggattctagaaaagcactgcaaatccaagaacagaaagtacaactggaa
gaagcagtggttagattaagacataatgaacgagaaatgaggaataccttagaaaagttt
actgcaagcatccagcgtttatcagagcaagaagagtatttgagtgtccaagttaaggaa
cttgaagctaatgtacttgctacagcccctgacaaaaaaaagcagaaattgctagaagaa
aacatcagtgctttcaaaacagaatatgatgatgtggctgagaaagctggcaaagtagaa
gctgaggttaaacggttacacaatatcattgtagaaatcaataaccataaactccaggcc
caacaagataaacttgacaaaataaataagcaattagatgaatgtgcttctgttattact
aaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaggcacaagactctgtt
tttcgcacagagaaagagataaaagatactgagaaagaagtcagtgacttaacagcagag
ctaaaaagtctggacgacaaagcaacagaggtcataaataatacaaaggctgcagagaat
tccttaccagagatccagaaagaacatcgtaatctacttcaagaactaaaagttattcaa
gaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaactcgaacagata
gatggtcacattgctgaacacaattctaaaataaaatattggcaaaaagagatttcaaaa
atatcattacatcctgtagaagataatcctgttgaagaggtttcatttctgagccgagag
gatcttgaagcaatcaagaatccagattctataacaaatcagattgcacttttggaagcc
cagtgtcatgaaatgaaaccaaacctcggtgccattgcagagtataaaaagaaggaagaa
ttatatttgcaacgggtagcagaattggacagaattacttctgaaagagatagctttaga
caggcatatgaagatcttcgaaaacaaaggcttaatgagtttatggcaggtttttatata
ataacaaataaactaaaagaaaattaccaaatgcttactttaggaggggatgctgaactg
gagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgttcgaccacct
aagaaaagttggaagaagatcttcaacctctcaggaggagagaaaacacttagctcattg
gccttagtatttgctcttcaccactacaaacccactcccctttatttcatggatgagatt
gatgcagcccttgattttaaaaatgtgtccattgttgcattttatatatacgaacaaaca
aaaaatgctcagttcataataatttctcttcgaaataatatgtttgagatttcagatcgt
cttattggaatttacaagacatacaatattacaaaaagtgttgcagtaaacccaaaagaa
attgcatcaaaaggactttgttga
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