Sciurus carolinensis (gray squirrel): 124992985
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Entry
124992985 CDS
T08117
Name
(RefSeq) plastin-1 isoform X1
KO
K17275
plastin-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124992985
04147 Exosome [BR:
ncar04147
]
124992985
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124992985
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of microglial cells
124992985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EH
CAMSAP_CH
DUF5580
SPARC_Ca_bdg
EF-hand_EFHB_C
SAPC2_N
Motif
Other DBs
NCBI-GeneID:
124992985
NCBI-ProteinID:
XP_047420394
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Position
9:complement(14478447..14587877)
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AA seq
630 aa
AA seq
DB search
MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKIL
AVADNNKDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSY
SEEEKVAFVNWINKALENDPDCKHLIPMNPNDDSLFTSLADGILLCKMINLSEPDTIDER
AINKKKLTPFTVSENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLFA
DIEISRNEALIALLNEGEELEELMKLSPEELLLRWVNYHLTNAGWRTISNFSQDIKDSRA
YFHLLNQIAPKGDREGGSAIAIDLSGFNEKNDLKRAEFMLQEADKLGCRQFVTPADVVSG
NPKLNLAFVANLFNTYPCLHKPDNNDIDMNLLEGESKEERTFRNWMNSLGVNPYINHLYS
DLADALVIFQLYEMIRVPVDWNHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGI
AGQDLNEGNSTLTLALVWQLMRRYTLNVLSDLGEGEKVNDEIIIKWVNQTLKSANKSTSI
SSFKDKSISTSLPVLDLIDAIAPNAVRQEMIKRENFSEEDKLNNAKYAISVARKIGARIY
ALPDDLVEVKPKMVMTVFACLMGKGLNRIK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcactaccaccatctcccgagaggagcttgaagaactgcaggaagcattt
aataagatagatattgataacagtgggtatgttagtgactatgaacttcaggacctattt
aaggaagcaagccttcctcttcccggctacaaggtacgcgagattgtggagaaaattcta
gcggttgcggacaacaacaaagatggcaaaatcagttttgaagagtttgtgtcactaatg
caagagttaaaaagcaaagatatcagcaaaacattccgaaaaataattaacaagagggaa
gggattactgctattgggggaacttcatccatttccagcgagggcacacagcattcttac
tcagaggaagaaaaagtggcttttgttaactggataaacaaggccctggagaatgatcct
gactgtaagcatctcatacccatgaatcccaatgacgacagccttttcacgtctcttgca
gatggcatccttctttgcaaaatgatcaacttatctgaaccagatacaattgatgaaaga
gccattaataagaaaaagctcactccttttactgtttctgaaaatctaaacctagccctg
aattctgcttcagccattggttgtacagtggtcaatattggtgcacaggacctcaaagaa
ggaaaacctcacttggtcttgggacttctctggcagatcatcaaagttggtctttttgct
gatattgagatttccaggaatgaagctttgattgcattgctaaatgaaggtgaagaacta
gaggagctgatgaagctttctcctgaggagttactgctgcgatgggtgaactaccacctc
accaatgcagggtggcgtaccatcagcaacttcagccaggacattaaggattcaagagca
tattttcatctgcttaatcagattgcccctaaaggtgaccgagaaggtggatctgccatt
gccattgacctttcaggatttaatgagaaaaatgacctgaagcgtgctgaattcatgctt
caagaagcagataaactaggctgcagacagtttgttactcctgccgatgtggtttcaggc
aatcccaaacttaatttagcctttgtagctaatctttttaacacatatccatgccttcac
aaacctgataataatgacatcgatatgaatttattggaaggagagagcaaggaagagagg
acctttcggaactggatgaattccctgggggtcaacccatacattaatcacctgtacagt
gaccttgcagatgctctggtgatcttccagctctatgagatgatccgagtgccagttgac
tggaaccacgtcaacaaacctccttatcctgctctcggagggaacatgaagaagattgaa
aactgtaactacgcagtggagcttgggaagaataaggccaaattctccttggttggtatt
gctgggcaggacctaaatgaagggaattcaacacttactctggcactggtatggcagctg
atgagaaggtatacattgaatgtgttatcagatcttggagagggtgaaaaagtaaatgat
gaaattattattaaatgggtcaaccagactcttaaaagtgcaaacaaaagtacttctatt
tccagcttcaaggataaatctattagcacaagtttacctgtcctagacttaatagatgcc
attgcaccaaatgcagttcgtcaggaaatgatcaagagagaaaacttttctgaagaggac
aaactgaacaatgctaaatatgccatttcagttgctcgaaagattggtgctcggatttat
gcattacctgacgaccttgtagaagtaaaaccaaagatggttatgacggtgtttgcatgc
ttaatgggaaaaggactgaacagaataaaataa
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