Sciurus carolinensis (gray squirrel): 124992995
Help
Entry
124992995 CDS
T08117
Name
(RefSeq) eukaryotic initiation factor 4A-II isoform X1
KO
K03257
translation initiation factor 4A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124992995
03012 Translation factors [BR:
ncar03012
]
124992995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124992995
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124992995
mRNA cycle factors
Stress granule specific factors
124992995
Translation factors [BR:
ncar03012
]
Eukaryotic type
Initiation factors
eIF-4
124992995
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124992995
Exosomal proteins of bladder cancer cells
124992995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124992995
NCBI-ProteinID:
XP_047420415
LinkDB
All DBs
Position
9:56928497..56934681
Genome browser
AA seq
408 aa
AA seq
DB search
MSGGSADYNSREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAI
QQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQK
VILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKM
FVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKK
EELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFT
VSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH
RIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggctccgcggattataacagcagagaacatggaggcccagagggaatggac
cccgatggtgtcatcgagagcaactggaatgagattgttgataactttgatgatatgaat
ttaaaggagtctcttcttcggggcatctatgcttatggttttgagaagccttcagctatt
cagcagagagctattattccctgtattaaagggtatgatgtgattgctcaagctcagtca
ggtactggcaagacagccacatttgctatttccatcctgcaacagttggagattgagttc
aaggagacccaagcactagtattggcccccaccagagaactggctcaacagatccaaaag
gtgattctggcacttggagactatatgggagcaacttgtcatgcctgcattggtggaaca
aatgttcgaaatgaaatgcaaaaactgcaggccgaagcaccacatattgttgttggtaca
ccagggagagtgtttgatatgttaaatagaagatacctttctccaaaatggatcaaaatg
tttgttttggacgaagcagatgaaatgttgagccgagggtttaaggatcaaatctatgag
atttttcaaaaattaaatacaagtattcaggttgtgttgctttctgccacaatgccaact
gatgtgttggaagtgaccaaaaaatttatgagagatccaattcgaattctggtgaagaag
gaagaattgacccttgaaggaatcaaacaattttacattaatgttgaaagagaggaatgg
aagttggacacactttgtgacttgtacgagacactgaccattacacaggctgttattttt
ctcaatacaaggcgcaaagtggactggctcacagagaaaatgcacgccagggacttcaca
gtttctgctctgcatggtgacatggaccagaaagagagagatgttatcatgagagaattc
cgatcagggtcaagccgagttctgatcactactgacttgttggctcgtgggattgatgta
caacaagtgtctttggttataaactatgatctacctaccaatcgtgaaaactatattcac
agaattggcagagggggtcgatttgggaggaaaggtgtggctataaactttgttactgaa
gaagacaagaggattcttcgtgacattgagactttctacaatactacagtggaggaaatg
cccatgaatgtggctgaccttatttaa
DBGET
integrated database retrieval system
