Sciurus carolinensis (gray squirrel): 124993007
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Entry
124993007 CDS
T08117
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124993007
03009 Ribosome biogenesis [BR:
ncar03009
]
124993007
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124993007
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
RNase
124993007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
124993007
NCBI-ProteinID:
XP_047420441
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All DBs
Position
9:18328275..18338761
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AA seq
550 aa
AA seq
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MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH
MQTFYRYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRI
GGISGIFKSHDYRKGHFEYPPYNPSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRSI
YHYGNKKQLLKMKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAA
DKGQTAKATKFLALDKCLPHRDFLQVLEIEHDPSAPDYLEYDIEWLTILKATNNLINVTG
NLWNMPENNGLHTKWDYSATEEAMKEVLEKLNHDLRVPCNFSVTAACYDPTKPQTQMQLV
HRINPQTTEFCAQLGITDINVSLQKAKEEHHLCGEYEEQDDVESNNSGEDRSEYNTDTSA
LSSINPDEIMLDEEEEDEDNIITAHSDMNTPSIEPSLNQASDFSASFSDVRILPGSMIVS
SDDTSGSPTSREGKLGEAVEVENEKDLTEVPSKRLSDEHEPEQRKKIKRRNQEIYAAVDD
DDDDDDDDVA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtggccgtggccggctgctgccacggcgagctggacaagatctatgagacgctg
gcgctggccgagcggcgtggcccggggcccgtggaccttcttctgtgctgtggcgacttc
caggcggtgcgcaacgaggccgatctgcgctgcatggctgtgccgcccaagtaccgccac
atgcagaccttctacaggtattactctggagagaaaaaggccccagttcttacagtcttc
attgggggaaaccatgaagcctcaaatcatttgcaagagttaccctatggtggctgggtg
gcaccaaacatttattatttaggtttggctggcgtggtaaaataccgaggtgtaaggatt
ggtggaatctccggtatctttaaatctcatgactatcggaaaggtcattttgagtacccc
ccttacaacccatctacaataagaagtatttatcacgtgagaaatattgaagtctataaa
ttaaaacagctgaagcagcctatagatatattcttatctcatgactggccaagaagtatt
tatcattatggaaataagaagcaacttcttaagatgaaatcttttttccgacaagaagtg
gaaaataacacattaggaagtcccgctgcttcggagcttttagagcacctgaaacctact
tactggttttctgcacaccttcatgtgaaatttgcagccttgatgcagcatcaggccgcg
gataaaggacagacagccaaagcaaccaaatttttagccttggacaaatgcttaccgcac
agagactttcttcaggtcttagaaatagaacatgaccccagtgctcctgattacttggag
tatgatattgaatggctcactattctcaaggctactaacaatcttattaatgtgactggg
aacctgtggaatatgcctgagaataatggcctgcatacaaagtgggattatagtgcaaca
gaagaagctatgaaggaagtattggaaaaactgaatcatgacctcagagttccatgtaac
tttagtgtaacagctgcttgttatgaccctaccaagccacagactcaaatgcagctggtt
cataggatcaaccctcagactactgagttttgtgcccagctcggcatcacagacattaat
gtcagccttcagaaggccaaggaagagcatcatttgtgtggtgaatatgaagaacaggat
gatgtggagagtaataactctggagaggaccggagtgaatacaatacagacacatctgct
ctatcgtctatcaatccagatgaaataatgttagatgaagaggaggaggatgaagataat
attataactgcacatagtgacatgaacacaccatccatagaaccctctttgaatcaagct
tctgacttttctgcaagcttctctgatgtcaggatcttgccgggttccatgattgtatct
tctgatgatacatcaggttcaccaactagtagagaagggaaacttggtgaggctgtggag
gtggagaatgagaaggacttaactgaggtgccatcaaagagactgagtgatgaacatgaa
cctgaacaaagaaagaaaattaagaggaggaatcaagaaatctatgctgcagtagatgat
gatgatgatgatgatgatgatgatgtggcataa
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