KEGG   Sciurus carolinensis (gray squirrel): 124993007
Entry
124993007         CDS       T08117                                 
Name
(RefSeq) lariat debranching enzyme
  KO
K18328  lariat debranching enzyme [EC:3.1.-.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncar03041]
    124993007
   03009 Ribosome biogenesis [BR:ncar03009]
    124993007
Spliceosome [BR:ncar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    124993007
Ribosome biogenesis [BR:ncar03009]
 Eukaryotic type
  90S particles
   RNase
    124993007
SSDB
Motif
Pfam: DBR1 Metallophos Metallophos_2
Other DBs
NCBI-GeneID: 124993007
NCBI-ProteinID: XP_047420441
LinkDB
Position
9:18328275..18338761
AA seq 550 aa
MRVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRH
MQTFYRYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRI
GGISGIFKSHDYRKGHFEYPPYNPSTIRSIYHVRNIEVYKLKQLKQPIDIFLSHDWPRSI
YHYGNKKQLLKMKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHVKFAALMQHQAA
DKGQTAKATKFLALDKCLPHRDFLQVLEIEHDPSAPDYLEYDIEWLTILKATNNLINVTG
NLWNMPENNGLHTKWDYSATEEAMKEVLEKLNHDLRVPCNFSVTAACYDPTKPQTQMQLV
HRINPQTTEFCAQLGITDINVSLQKAKEEHHLCGEYEEQDDVESNNSGEDRSEYNTDTSA
LSSINPDEIMLDEEEEDEDNIITAHSDMNTPSIEPSLNQASDFSASFSDVRILPGSMIVS
SDDTSGSPTSREGKLGEAVEVENEKDLTEVPSKRLSDEHEPEQRKKIKRRNQEIYAAVDD
DDDDDDDDVA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgcgggtggccgtggccggctgctgccacggcgagctggacaagatctatgagacgctg
gcgctggccgagcggcgtggcccggggcccgtggaccttcttctgtgctgtggcgacttc
caggcggtgcgcaacgaggccgatctgcgctgcatggctgtgccgcccaagtaccgccac
atgcagaccttctacaggtattactctggagagaaaaaggccccagttcttacagtcttc
attgggggaaaccatgaagcctcaaatcatttgcaagagttaccctatggtggctgggtg
gcaccaaacatttattatttaggtttggctggcgtggtaaaataccgaggtgtaaggatt
ggtggaatctccggtatctttaaatctcatgactatcggaaaggtcattttgagtacccc
ccttacaacccatctacaataagaagtatttatcacgtgagaaatattgaagtctataaa
ttaaaacagctgaagcagcctatagatatattcttatctcatgactggccaagaagtatt
tatcattatggaaataagaagcaacttcttaagatgaaatcttttttccgacaagaagtg
gaaaataacacattaggaagtcccgctgcttcggagcttttagagcacctgaaacctact
tactggttttctgcacaccttcatgtgaaatttgcagccttgatgcagcatcaggccgcg
gataaaggacagacagccaaagcaaccaaatttttagccttggacaaatgcttaccgcac
agagactttcttcaggtcttagaaatagaacatgaccccagtgctcctgattacttggag
tatgatattgaatggctcactattctcaaggctactaacaatcttattaatgtgactggg
aacctgtggaatatgcctgagaataatggcctgcatacaaagtgggattatagtgcaaca
gaagaagctatgaaggaagtattggaaaaactgaatcatgacctcagagttccatgtaac
tttagtgtaacagctgcttgttatgaccctaccaagccacagactcaaatgcagctggtt
cataggatcaaccctcagactactgagttttgtgcccagctcggcatcacagacattaat
gtcagccttcagaaggccaaggaagagcatcatttgtgtggtgaatatgaagaacaggat
gatgtggagagtaataactctggagaggaccggagtgaatacaatacagacacatctgct
ctatcgtctatcaatccagatgaaataatgttagatgaagaggaggaggatgaagataat
attataactgcacatagtgacatgaacacaccatccatagaaccctctttgaatcaagct
tctgacttttctgcaagcttctctgatgtcaggatcttgccgggttccatgattgtatct
tctgatgatacatcaggttcaccaactagtagagaagggaaacttggtgaggctgtggag
gtggagaatgagaaggacttaactgaggtgccatcaaagagactgagtgatgaacatgaa
cctgaacaaagaaagaaaattaagaggaggaatcaagaaatctatgctgcagtagatgat
gatgatgatgatgatgatgatgatgtggcataa

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