Sciurus carolinensis (gray squirrel): 124993039
Help
Entry
124993039 CDS
T08117
Name
(RefSeq) zinc finger and BTB domain-containing protein 20 isoform X1
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124993039
04121 Ubiquitin system [BR:
ncar04121
]
124993039
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
124993039
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124993039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2HC_2
Zf-C2H2_ZNF451_2nd
zf-C2H2_15
BTB_KLHL33
zf-C2H2_jaz
zf-met
zf-C2H2_2
BolA
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
124993039
NCBI-ProteinID:
XP_047420512
LinkDB
All DBs
Position
9:77662568..78455703
Genome browser
AA seq
741 aa
AA seq
DB search
MLERKKPKTAENQKASEENEITQPGGSSAKPGLPCLNFEAVLSPDPALIHSTHSLTHSHA
HTGSSDCDISCKGMTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRC
VLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASIL
QIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSV
DRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMER
YLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNESEECTEDT
DQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDGQAEPTQPEQATETPADSG
PQPNQLETGASSPERNNEVEMDNRVITVSNSSDKSVLQQPSVNTSIGQPLPSTQLYLRQT
ETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKPFLFSLPQPLAGQQTQFV
TVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVH
TGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEK
SYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPPGVRTGPPGVVACTEGTTYVCSVC
PAKFDQIEQFNDHMRMHVSDG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgctagaacggaagaaacccaagacagctgaaaaccagaaggcatctgaggagaatgag
attactcagccgggtggatccagcgccaagccgggccttccctgcctgaactttgaagct
gttttgtctccagacccagccctcatccactcaacacattcactgacacactctcacgct
cacaccgggtcatctgattgtgacatcagttgcaaggggatgaccgagcgcattcacagc
atcaaccttcacaacttcagcaattccgtgctcgagaccctcaacgagcagcgcaaccgt
ggccacttctgtgacgtgacggtgcgcatccacgggagcatgctgcgcgcacaccgctgc
gtgctggcagccggcagccccttcttccaggacaagctgctactgggctacagcgacatc
gagatcccttcggtggtgtcagtgcagtcagtgcaaaagctcattgacttcatgtacagc
ggcgtgctgcgagtctcgcagtcggaagctctgcagatcctcacagctgccagcatcctg
cagatcaaaacagtcatagatgagtgcacacgcatcgtgtcacagaacgtgggcgatgtg
ttcccaggcatccaggactcgggccaggacacgccacggggcacccctgagtcaggcacg
tcgggccagagtagtgacacggaatcgggctacctgcagagccacccacaacacagtgtg
gatagaatctactccgcactctatgcctgctccatgcaaaatggcagcggcgagcgctcc
ttctacagcggtgcggtggtcagccaccatgagactgcgctcggcctgccccgcgaccac
cacatggaagaccccagctggatcacacgcatccacgagcgctcgcagcagatggagcgc
tacctgtccaccacccccgagaccacgcactgccgcaagcaaccccggcctgtgcgcatc
cagacattggtgggcaacatccacatcaagcaggagatggaggatgattatgactactat
gggcagcaaagggtgcagatcctggagcgcaatgaatccgaagagtgcacagaagacacg
gaccaggctgagggcaccgagagtgaacccaaaggggaaagcttcgactccggtgttagc
tcctccataggcacagaacccgactcggtggaacagcagtttgggccgggggcggcccga
gatggccaggcagagcccacccaacccgagcaggccacggaaacccctgccgactctggc
cctcagccaaaccagctagaaacaggtgcctcctctccagaaagaaacaatgaggtggag
atggacaacagggtcatcacagtcagcaacagctcagacaagagtgtcctgcaacagcct
tcagtcaacacgtccatcgggcagccattgccaagtacccagctctacttacgccagaca
gaaaccctcaccagcaacctgaggatgcctctgaccttgaccagcaacacacaggtcatt
ggcacagcgggcaacacctatctgccggccctcttcactacccagcccgcgggcagtggc
cctaagcctttcctcttcagcctgccacaacccctggcaggccagcagacccagtttgtg
acagtgtcccagcccggcctgtcaacctttactgcacagctgccagcgccacagcccctg
gcctcatctgcaggccacagcacagccagtgggcaaggcgaaaaaaagccttatgagtgc
actctctgcaacaagactttcaccgccaaacagaattacgtcaagcacatgttcgtacac
acaggtgagaagccccaccaatgcagcatctgttggcgctccttctccttaaaggattac
cttatcaagcacatggtgacacacacaggagtgagggcataccagtgtagtatctgcaac
aagcgcttcacccagaagagctccctcaatgtgcacatgcgcctccaccgaggggagaag
tcctatgagtgctacatctgcaaaaagaagttctcccacaagaccctcctggagcgacac
gtggccctgcacagtgccagcaacgggacccctccggcaggcacacccccgggtgtccgc
acaggtcccccgggcgtggtggcctgcacagaggggaccacttacgtctgctccgtctgc
ccagcaaagtttgaccaaatcgagcagttcaacgaccacatgaggatgcatgtgtctgac
ggataa
DBGET
integrated database retrieval system
