Sciurus carolinensis (gray squirrel): 124993043
Help
Entry
124993043 CDS
T08117
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
ncar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124993043
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124993043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124993043
04090 CD molecules [BR:
ncar04090
]
124993043
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
Nectin family
124993043
CD molecules [BR:
ncar04090
]
Proteins
124993043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
ig
V-set
I-set
Ig_2
Ig_6
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
124993043
NCBI-ProteinID:
XP_047420536
LinkDB
All DBs
Position
9:complement(81234189..81379023)
Genome browser
AA seq
512 aa
AA seq
DB search
MARTPGPAPLCPGGGKAQLSSASPPGAGLLLPPPTPPPLLLLLLFPLLLFSRLCGALAGP
IIVEPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSTQTIAVHHPQYGFSVQGEYQG
RVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPD
SLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIVSKYKLFPTRFA
RGRRLTCVVKHPALEKDIRYSFMLDIQYAPEVSVTGYDGNWFVGRRGVNLKCNADANPPP
FKSVWSRLDGQWLDGLLASDNTLHFVHPLTFNYSGVYVCKVTNSLGQRSDQKVIYISDVP
FKQTSSIAVAGAVIGAVLALFIIAVFVTVLLTPRKKKPSYLDKVIDLPPTHKPPPLYEER
SVSLPQKELLYQTEHLPLQTQKNEREICSLPPSNGLNTRSFDYEDENPVGEDGIQQMYPL
YNQMCYQDRSPVKHHQNNDPKRVFINPREHYV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaccccggggccggccccgctgtgtcccggaggcggcaaagcacaactttcc
tccgcttctccccccggggccgggctcctgctgccgcccccgacgccaccgccgctgctg
ctgctgctgctcttcccgctgctgctcttctcccggctctgtggtgccttagctggacca
attattgtggagccacatgtcacagcagtatggggaaagaatgtttcattgaagtgttta
attgaagtaaatgaaaccataacacaaatttcatgggagaagatacatggcaaaagtaca
cagactattgcagttcatcatcctcaatatggattctctgttcaaggagaatatcaggga
agagtcttgtttaaaaactattcacttaatgatgcaacaattactctacataacatcgga
ttctctgattctggaaaatacatatgcaaagctgttacatttccacttggaaatgcccag
tcctctacaactgtaactgtgttagttgaacccactgtgagcctgataaaagggccagat
tctttaattgatggaggaaatgaaacagtagcagccatttgtattgcagccactggaaaa
ccagttgcacatattgactgggaaggtgatcttggtgaaatggaatccactacaacttct
tttccaaatgaaacagcaacaattgtcagcaagtataagctgtttccaaccagatttgct
agaggaaggcgacttacttgtgttgtaaaacatccagccttggaaaaggatatccgatac
tccttcatgttagatatacagtatgcccctgaagtttcagtaacaggatatgatggaaat
tggtttgtggggagacgaggtgttaatctcaagtgtaatgctgatgcaaatccaccacca
ttcaaatctgtgtggagcaggttggatggacaatggcttgatggtttgttggcttcagat
aatactcttcattttgtccatccgctgactttcaattattctggtgtttacgtctgtaaa
gtgaccaattctcttggccaaagaagtgatcaaaaggtcatctacatttcagatgttcca
tttaagcagacctcttccatagctgtagctggtgctgtcattggagctgtccttgccctt
ttcatcattgctgtctttgtgactgtgctgctcactcctcggaaaaagaaaccatcctac
cttgacaaagtgattgatcttccacccacacataaaccacctcctttgtatgaagaacga
tctgtatctttgcctcaaaaagaactcttgtatcagactgaacacttgcctttgcagact
cagaaaaatgaaagagaaatttgcagtcttccaccctctaatggcctaaataccaggagt
tttgactatgaagatgagaacccagtgggagaagatgggattcagcagatgtaccctctt
tacaatcagatgtgctaccaagaccggagccctgtcaaacatcatcaaaacaatgacccc
aagagagtcttcatcaacccacgagaacattatgtgtga
DBGET
integrated database retrieval system