KEGG   Sciurus carolinensis (gray squirrel): 124993054
Entry
124993054         CDS       T08117                                 
Name
(RefSeq) WD repeat-containing protein 53 isoform X1
  KO
K24748  WD repeat-containing protein 53
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ncar04990]
    124993054
Domain-containing proteins not elsewhere classified [BR:ncar04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   124993054
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML WDR55 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd EIF3I Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_SPT8 WDR90_beta-prop_4th WD_LRWD1 VPS11_N CFAP43_N WD40_CFAP43 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 124993054
NCBI-ProteinID: XP_047420555
LinkDB
Position
9:66710394..66720765
AA seq 359 aa
MMAVKWTGGHSSPILCLNASKDGLVVSGAEGGDLVAWGEDGTPLGHMHFQGADDVTSVLF
SPSCPTKLYASHGETISILDIRLLKDSLDHFHVNEEEINCLSLNETENLLASADDSGAIK
ILDLENKKVSRSLKRHSNICSSVAFRPQRPQSLVSCGLDMQVMLWNLQKARPLWITNLQE
DETEEMESPQSPGQLLNPALAHSVSVASCGNIFSCGAEDGKVRIFRVMGVKCEQELGFKG
HTLGVSQVCFLSESYLLLTGGNDGKIMLWDVSSEVEKKQKSPAKQNHRKKTKRATNTKQG
GNINASVTDKEEHGKISPKLNIEHGEKVNWLLGTKIKGHQNILVADQTSCISVYPLNEF
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgatggcagtgaagtggactggtggacattcttctcctattctctgcctgaatgcaagt
aaagacgggctagtggtttctggagcagagggtggagatctcgtggcttggggtgaagat
ggtactcctttaggacacatgcatttccaaggagctgatgatgttaccagtgtcttattt
tctccctcctgccccaccaagctctatgcgtcacatggagaaaccattagcatactggat
atccggttgctcaaagattccctggaccattttcatgtgaatgaagaagaaatcaattgt
ctttcattgaatgaaactgaaaacctgctggcttctgctgatgactctggggcaatcaaa
atcctagacttggaaaataagaaagttagcagatccctgaagagacattccaatatctgt
tcttctgtggcttttcgacctcagaggcctcagagtctggtgtcatgtggcctggatatg
caggtgatgctgtggaatcttcagaaagcccggccactctggattacaaatttacaagag
gatgaaacagaagaaatggaaagcccacagtcacctggtcagctcttaaaccctgctcta
gcccactctgtctctgtggcatcatgtggcaatatttttagttgtggtgctgaagatggt
aaggttcgaatctttagggtgatgggagtcaagtgtgaacaagaactgggatttaagggc
cacactttgggggtgtcccaggtctgctttctgtcagaatcttatttactgcttactgga
gggaatgatgggaagataatgttatgggatgtgagcagtgaagttgagaaaaaacagaag
agtcctgcaaaacagaaccacagaaagaaaactaaaagagcaactaacaccaagcagggt
ggaaacattaatgcttcagtaacagacaaggaagaacatggcaaaatttcaccaaagcta
aatattgaacatggagaaaaagtgaactggctcttaggtacaaaaattaaaggacatcaa
aatatattagtagctgatcagacaagttgtatatctgtatatcccttaaatgaattttaa

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