Sciurus carolinensis (gray squirrel): 124993088
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Entry
124993088 CDS
T08117
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04726
Serotonergic synapse
ncar05010
Alzheimer disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
124993088
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124993088
05022 Pathways of neurodegeneration - multiple diseases
124993088
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124993088
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncar00535
]
124993088
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124993088
Peptidases and inhibitors [BR:
ncar01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
124993088
Proteoglycans [BR:
ncar00535
]
Cell surface proteoglycans
Others
124993088
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Others
124993088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
124993088
NCBI-ProteinID:
XP_047420615
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All DBs
Position
9:complement(123722401..123964252)
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AA seq
770 aa
AA seq
DB search
MLPSLALLLLAAWTAGALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHAHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDSIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVTDVEEE
EADDDEDVEDGDEGEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDSEEYCLAVCGSVMSQSLFKTTREPLPQD
PVKIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
QAVPPRPRHVFTMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
IKTEEISEVKMDAEFRHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL
VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagcttggcactgcttctgctggccgcttggacggctggggcgctggaggtg
cccactgatggcaatgctggcctcctggcagaacctcagatcgccatgttctgtggcaag
ctgaacatgcacatgaacgtgcagaatgggaaatgggagtcagatccatcggggaccaaa
acttgcattggtaccaaagagggcatcctgcagtactgccaagaagtctaccctgagctg
cagatcaccaatgtggtggaagccaaccaaccagtgaccatccagaactggtgcaagcgg
ggtcgcaagcagtgcaagacccacgcccacatcgtgatcccttaccgctgcttagttggc
gagtttgtaagtgatgctcttctagttcctgacaagtgcaaattcttacaccaggagcgg
atggatgtttgtgaaacccaccttcactggcacaccgtcgccaaagagacctgcagcgag
aagagcaccaacttgcatgactatggcatgttgctgccctgtggaattgacaagttccga
ggggtagagttcgtgtgctgcccactggccgaggagagtgacagtatcgattctgcagat
gcagaggaggatgactccgatgtgtggtggggtggagcagacacagactatgcagatggg
agtgaagacaaagtagtggaagtggcagaggaggaggaagtgactgatgttgaggaagaa
gaagccgatgatgacgaagacgtggaggatggtgacgagggagaggaggaggccgaggaa
ccctatgaagaggcaacagagaggaccaccagcattgccaccactaccaccaccaccacg
gagtctgtggaagaggtggtccgagaggtgtgctctgaacaagccgagaccgggccctgc
cgagcaatgatctcccgctggtactttgatgttactgaagggaagtgcgcccccttcttt
tacggcggatgtggcggcaacaggaacaactttgactctgaagagtactgcctggcggtg
tgtggcagcgtcatgtcccaaagtttattcaagactactcgggaacctcttccccaagat
cctgttaaaattcctacaacagcagccagcacccccgacgccgttgacaagtatcttgag
actcctggcgatgaaaatgagcacgcccacttccagaaagccaaggagaggctggaggcc
aagcaccgagagaggatgtcccaggtcatgagagaatgggaagaagcggaacgtcaagca
aagaacttgcccaaagctgataagaaggcagtgatccagcatttccaggagaaagtagaa
tctctggaacaggaagcagccaacgagaggcagcagctagtggagacgcacatggccaga
gtggaagccatgctcaatgaccgccgccgactggccctggagaactacatcactgcactg
caggctgttcctcctcggcctcgtcatgtgttcaccatgctgaagaagtatgtccgtgca
gagcagaaagacaggcagcataccctaaagcattttgagcatgtgcgcatggtggatccc
aagaaagctgctcagatccggtcccaggttatgacacacctccgtgtgatctatgagcgc
atgaatcagtctctgtccctgctttacaacgtacctgcagtggctgaggagattcaggat
gaagttgatgagctgcttcagaaagagcagaactactcggatgacgtcttggccaacatg
atcagcgaaccaagaatcagttatggaaacgatgctctcatgccgtctttgactgaaacg
aaaaccaccgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagcca
tggcatccttttggggtggactccgtgccagccaataccgaaaatgaagttgagcccgtt
gacgcccgccctgctgccgaccgaggactgaccactcgaccaggttccgggctgacaaat
atcaagacagaagagatctctgaagtgaagatggatgcggagttccgacatgactcagga
tttgaagttcgtcaccaaaaattggtgttctttgcagaagatgtgggttcaaacaaaggt
gcaatcattggactcatggtgggcggtgttgtcatagcgacagtgatcgtcatcaccttg
gtgatgctgaagaagaagcagtacacatccatccatcatggagtggtggaggttgatgct
gccgtgaccccagaggagcgccacctctccaagatgcaacagaatggctatgagaatcca
acttataagttctttgagcagatgcagaactag
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