Sciurus carolinensis (gray squirrel): 124993211
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Entry
124993211 CDS
T08117
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124993211
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
124993211
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
GluR_Homer-bdg
Motif
Other DBs
NCBI-GeneID:
124993211
NCBI-ProteinID:
XP_047420863
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Position
9:complement(8432174..8467001)
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AA seq
1004 aa
AA seq
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MVHLYNLHPFGSQQVVPCKLEPERVCGGGRDALFVAAGCKVEAFAVAGQELCQPRCAFST
LGRVLRMVYSEAGDYLVAIEEKNKATFLRAYVNWRSKRTENSRVCIRMVGHNVEVPFRDS
FRDQMSIVEMPLSEAPLCISCCPVKGDLLVGCTNQLVLFSLKCQVIDEEFSVLDFERSLI
IHIDCITPVEISFCVGYVAVMSDLEVLILKLESDPKNGERVNHHSHKTHTPVNRTEEGTG
SKTSQLEPDDFVICQKPTELLGEKSEQSGLSVTLESMGWADGSTEYCHVRHLLYRRFTPD
VSFYSLSDEIKLHSLHLLPVFHTGLLTSDGKNVSQEKELLSLFCFFSLPHVGYLYMVVKA
VELMSIYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAREEDPYMDTTLKACPPV
SLDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRESPKRLLSRKDNSVKNKIPP
AVEAGWNLYIVNTVSPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDTGQLE
PGEKAELLEAFKESCGHLGDCYSRLDTQHSHLTLPYYKMSGLSMAEVLARVDWAAENEPQ
KYEKGLIFYINHSLYENLDEELSEELAAKVVQMFHVTEPKQLPHILCSPSMKNVNPLTAL
SYLSKLDTYGFSSILVTLTKAAVALKMGDLATYGSEMKSHSEMKLVCGFILEPRLLIQQR
KGQMVPTELAVHLKDTQPGLLVAAVLGLQKNNKIGIEEADSFFKVLCGQDEDKIPQLLVD
FWEAQLVACLPDVVLQELCFKLTSQYIWRLSKRQPPDTTPLQTSEDLINACSHFGLIYPW
VHILISSDSLADKNYKEDLSKLQSLICGPSFDIASIIPFLEPLSEDTAAGLSVHVLCRTR
LREYEGCLDTLLERCPQAVIPYANHELREENRTLWWKKLLPELCQRVRRGGEKHQLYLSS
LKEALSVVAVELELRDFLNVLPEDGTAAFFLPYLLYCSRKKSLT
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacctgtacaacctgcacccgttcgggtcgcagcaggtggtgccctgcaagctg
gagcccgagcgggtctgcggcggggggcgcgacgcgctgttcgtggctgcaggctgcaag
gtggaggcgttcgcggtggccggccaggagctgtgccagcccaggtgcgccttctccacg
ctgggcagggtgctgcgcatggtctacagcgaggccggagactatttggtagcaatcgaa
gagaaaaacaaagccacgtttctgcgcgcctatgtgaactggagaagtaaaaggaccgag
aactctcgtgtgtgcattcgaatggtgggacacaacgtggaggtgcccttcagagacagc
ttcagggaccaaatgtctattgtcgaaatgcccctttccgaggcccccttgtgcatttcc
tgttgccccgtgaagggagacctccttgttggctgcacaaatcagttagtgttatttagt
ctgaagtgtcaggtcatcgatgaggaattctcagtcctggactttgaacgttcgctaatc
atacatatagattgcatcactcctgtcgaaatttctttttgtgttggatatgttgctgtc
atgtcagacttagaagtcttaattctaaaactggagtcggaccctaaaaacggagagaga
gttaaccaccattcacacaagacccacactccagtgaatcggacagaagaaggcactggc
agtaaaacgtcacagcttgagccggatgattttgtgatctgccaaaagcccacggaactt
cttggggagaagagtgagcagtctgggctctcggtcacgctggagtccatgggctgggct
gatggaagcacagaatactgccacgttcggcacctgctgtacagacgttttactcctgat
gtctcattctacagcctgtctgatgaaatcaagttgcattcccttcacctgctccccgtt
ttccacacaggtttgctcacctctgatggaaaaaatgtgtctcaggaaaaagagttgctg
agcctcttttgctttttctccctacctcacgtgggctatctctacatggtggtcaaggct
gttgaattaatgtcgatctaccagtaccctgagaagtctcagcaggccgtgctcacgcca
cagtttttacacgtcatcacaagcaacaacctgcagtgcttcacggtgcggtgcagcgca
gcggctgcccgggaggaggacccgtacatggacaccaccctgaaggcttgcccacctgtc
agtttggatgtctgtgctttaagaatacagcttttcataggcttgaaagccatctgtcac
tttaaaaaccacatcatactcttgaccaaagcagagcctgaggccattcctgagagaaga
gagtcacccaagaggcttctttctaggaaagacaacagtgttaagaacaaaatacctcct
gcagtcgaggctgggtggaatttgtacattgtgaatacagtctcaccagtacaactgtac
aaagaaatggtcgactacagcaatacctacaagaccgtgaaaacgcagagctgcatccac
ctgctcagcgaggctcatctgctagtgagggctgccctgatggacaccggccagctggaa
cctggagagaaagcagagcttttagaggcctttaaagaaagctgtgggcaccttggagac
tgttacagcaggctggacacccagcattcccacctgaccttgccgtactataagatgtct
ggcttgtccatggctgaagtcttggcacgtgtggactgggcagcggagaacgaaccacag
aaatatgagaagggattaatattttatattaatcattcactttatgaaaacctggatgaa
gaattaagtgaagaactagcagcaaaagtagttcagatgtttcatgtgactgagccgaag
caactgccccacatactctgcagcccttccatgaagaatgtgaatcctttaaccgccttg
agctacctgagcaagctggatacatatggattttcctcaatcctagtgaccctgaccaaa
gcagcagtggctctgaaaatgggagaccttgccacgtacggaagtgaaatgaagagccat
tcagagatgaagttggtgtgtggcttcattctggaacctcggctgctcattcaacagagg
aagggacagatggttccaacggagctagcggtgcacctgaaggacactcagcctggattg
ctcgtggccgcagtcctgggcttgcagaagaacaacaaaatcggaattgaagaagcagac
tctttctttaaggtgctctgtggtcaggatgaagataagattcctcagctcttggtggac
ttttgggaagctcagttagtggcctgtctcccagatgtggtacttcaggaactctgtttc
aagctcacgtcacagtatatctggagattatctaagaggcagcctcccgacaccacccca
ttgcaaacatcagaggatctgataaatgcctgcagtcactttggcttaatctacccatgg
gttcatatcttgatatcttctgattccttagctgataaaaattacaaagaagacctttca
aaattacagtctcttatctgtggtccttcattcgacatagcgtccatcattccgttcttg
gagccactctcagaagacaccgccgctggccttagtgtccacgttctgtgccgtactcgc
ttgagggagtatgaggggtgcctggacacgctgctcgagaggtgcccgcaggcggtcatt
ccctacgccaatcacgagctgagggaggagaaccggactctgtggtggaaaaaactgctg
cctgagctttgtcagagagtaaggcgtggtggagagaagcaccaactttacctgtcgtcg
ctgaaagaagcactgtccgttgtcgctgtggaactggaactcagggatttcttgaacgtc
ctcccggaagatggcacggctgcgttcttcttgccctatcttctttactgcagtcgcaaa
aaatcattgacttga
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