Sciurus carolinensis (gray squirrel): 124993272
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Entry
124993272 CDS
T08117
Name
(RefSeq) T-cell immunoreceptor with Ig and ITIM domains-like
KO
K16350
T-cell immunoreceptor with Ig and ITIM domains
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124993272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124993272
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
L1 family
124993272
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
Abhydrolase_9_N
partial_CstF
PsaO_TMD
Motif
Other DBs
NCBI-GeneID:
124993272
NCBI-ProteinID:
XP_047420956
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All DBs
Position
9:complement(78460660..78488020)
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AA seq
274 aa
AA seq
DB search
MLSFALPSAVGQFWSQKRPHLLPVGPLGRSMHWCLLLIWAQGLRQALFASAMTGTIVTKG
NISAEEGGSVILQCHLSSTMAEVTQVNWEQRDQLLAICHTKFGWYINPVFSERVTPGPRL
GLTFQSLTMNDTGEYFCIYHTYPDGIYEGSIFLEVLGSSVAEHSAGFLIPLLAALGVICM
GVVCIAVIRMVALARKKTSLRIHSAESDLRRSPSEQQEWSPSISSSPGSCVQAEATPAGL
CSVQREDDYAEPHDYFNVLSYRSLGSFNFLTETG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtttcgccttgccatctgcagtcggccagttttggtcacagaagaggccacac
ctgcttcctgtaggccccctgggcagaagcatgcactggtgtctactcctgatctgggcc
caggggctgaggcaggctctcttcgcctcagctatgacaggcacaatagtgacaaaaggg
aacatttctgccgaggaaggtggctctgtcatcctacaatgtcatctctcctccaccatg
gctgaagtgacccaagtcaactgggagcagcgggaccaacttctggccatttgtcatact
aaatttgggtggtacatcaacccagtcttcagtgagcgggtgaccccaggccctcgcctg
ggcctcactttccagtcgctgaccatgaatgacacgggagagtacttctgcatctatcac
acctaccctgatgggatttacgaggggagcatcttcctggaggtcctaggaagctcagtg
gcagagcacagtgccgggttcctgatcccattgctggcagcgctgggggtcatctgcatg
ggggtcgtctgcatagctgtcatcaggatggttgcattggctagaaagaagacatctctc
agaatccattctgcagaaagtgacctcaggagatcaccatcagaacagcaggagtggagc
cccagcatctcctcatcccctggaagctgtgtccaggcagaagctacccctgctggcctc
tgcagtgtgcagagggaagatgactatgctgagcctcatgattactttaatgtcctgagt
tatagaagcctggggagcttcaacttcctcacagagactggttag
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