Sciurus carolinensis (gray squirrel): 124993278
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Entry
124993278 CDS
T08117
Name
(RefSeq) tetratricopeptide repeat protein 34-like isoform X1
KO
K24947
tetratricopeptide repeat protein 34
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124993278
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
124993278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
ANAPC3
TPR_14
TPR_12
TPR_9
ARM_TT21_5th
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
124993278
NCBI-ProteinID:
XP_047420971
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All DBs
Position
1:207634502..207656803
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AA seq
1091 aa
AA seq
DB search
MSARELVAGLCRKGDQHLALGEPLLATAFYLAAFSCHAPSAVQSVQAALAEARGAPVVAT
LEAWCRGDGRIPAIHWDGMAVVSLTGALASAFLGALCPDHPAAVLHSLAGLLAHGRHGEV
ALRCTALLDAHSQQALELQLTRGLAQVLSGERAGDGVADYLQAFASSADRTVAFVRTHQH
PYLPTLLGALRNHLSAQPGATGSAGRQETDCRGLLAALDPEGTWSELLSPEALLHGGRYE
DSLAACSRALRSDPSRDRHQDERLAALLVTRAAAAFFLGGRTGDVLRDLQEAFRESPGAA
RRRLRAVLSAADQERIREQAREAADAGFAHFQEAVRRRPQLREDAGREALVPVAHALRVL
LRLEPAGERPVLGTRLAECLLLAGDVAGARALCERLLRPRHHGAPAGDRAVDCAPLLALR
GFCALHVGDAPRAKEDFQAVVERGAPHRGGCVRALCGRGLLRVLAGSGFLGALDYVTACR
LQPEEALMAAKAYVPWNQRGLLLTVLREEGRRMLLRRRDPGPAGTPACRSQGAEKDDPAA
QEGPRLTFAWTCCGRDARGVYQLATMLMELDMEDESSRLLAADALYRLGRLEEAHKSLLV
ALSRRPQATPVLARLALLQLRRGFSYNANQLVKKVVQSGDTACLQPTLDVFDHEDRLLLQ
GYCHARALSILRARPSGPDSGAHTREAIAYLSLAIFAAGTQANESLLVRAGCYGLLGQKK
TAVFDFNSVLRAKPGNVQALCGRALVYLTLDQLQDAVDDIISALRLDPGTVVPEIRSLRP
EARVPLTQGLHSRCRALLSQPLDTGVSLRDEDTQGLLAVGEALTKIDATQPSWHLLLADI
LMVLGRYEEADTCLQGAPHPTPPSAAARARRGLLLLRRGAVPAAVQDLQGLAEVDAQDLH
FLLHLLGASERQSISQVAAQEASILLDTGHPRQALGYCSLAVQAGGSRTCHLRLRSACLA
ELREFDRALQDLDRVIQEGTGAGDLPGRAEDFCSRGRLLLGLGDEEGAAAAFARALALSP
APAQSRLWKQPGQAPTAGTFLRLGQCCLEGQRHGEARTVAQSRFLVNPNHGGLKRPKAQT
QRTVSSGCRLL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgggagctcgtggccggcctctgccggaagggggaccagcacctggccctg
ggggagcccctgctggccacggccttctacctggctgccttcagctgccacgcgccctca
gctgtgcagagcgtgcaagcagcgctggccgaggctcggggggcccctgtggtggccacc
ctggaggcctggtgtcgtggggacggccgaatcccggccatccactgggacggcatggca
gtcgtatccctgaccggggctctggcctccgccttcctcggcgccctctgcccagaccac
ccggccgccgtcctgcactcgctggctgggctgctggcccatgggcgacacggggaggtg
gccctgcgctgcactgccctgctggacgctcactcccagcaagccctggagctgcagctg
acccgcggcctggcccaggtcctgtctggggagcgggcaggcgatggcgtggccgactac
ctccaggccttcgcctcaagcgcagaccggaccgtagccttcgtccgcacccaccagcac
ccctacctccccacgctgctcggagccctccggaaccacctctcagcacagccgggggcc
acgggcagcgctggccggcaggagactgactgccggggactcctggccgccctggacccc
gagggcacctggagcgagctcctgtcaccagaagcactgctgcacggtggcaggtacgag
gacagcctggcagcctgcagcagggccctgcggtcagaccccagcagggacagacaccaa
gacgagcgcctggcggccctgctggtcacgcgcgcggccgcggccttcttcctgggcggc
cggactggcgacgtgctgcgggacctgcaggaggccttccgcgagagcccgggcgcggcg
cggaggcggctccgggcagtgctctcggccgcagaccaggaacgcatccgagagcaggct
cgggaggcggcggatgcgggcttcgcccacttccaggaggccgtgcgtcggcggccccag
ctccgcgaggacgcggggcgcgaggcgctggtcccggtggcccacgcgctccgtgtcctg
cttcgcttggagccagcaggggagcgacctgtgctgggcacccgcctggcggagtgcctg
ctgctggccggggacgtggcgggagcccgggcgttgtgcgagcgtctcctgcggcccagg
caccatggggcgccagctggggaccgcgccgtggactgcgcgcctctgttggcgctgcgg
ggcttctgcgcgctgcacgtgggcgacgccccgcgcgccaaggaggatttccaggcggtg
gtggagcggggggcaccgcaccggggcggctgcgttcgcgcgctctgcggccgagggctg
ctgcgggtgctggccggcagcgggttcctgggagcgctggattatgtcactgcctgccgg
ctgcagcccgaggaggcgctgatggctgccaaggcctacgtgccctggaaccagcggggg
ctgctgctgaccgtgctgcgagaggagggccgcaggatgctgctgcgcaggcgggaccct
ggccctgcgggcacaccggcctgcagaagccaaggcgcggagaaggacgacccggcagcg
caggaagggcctcgtctgaccttcgcctggacttgctgtggaagggatgcccgtggcgtg
taccagctggccacaatgctgatggagctggacatggaggacgagagctcgcgactcctg
gcagctgacgccctgtaccgcctgggccgcctggaagaggcccacaagtccctgctggtg
gccctctcccggaggccccaggcaaccccagtgctggcacggctggccctgctgcagctg
cggaggggcttctcttacaatgccaaccagctggtgaagaaggtggtccagtctggggac
acggcctgcctgcagcccaccctggacgtctttgaccacgaggaccggctgctgctgcaa
ggttactgccacgcccgggccctgagcatcctgcgagcgaggccgagcgggccggacagt
ggggcccacaccagggaggccatcgcctacctctctctggccatcttcgctgcggggaca
caggccaacgagtcccttctcgtccgagccggctgttatgggctcctgggccagaagaag
acggccgtgtttgacttcaactccgtgctgcgggccaagccgggcaacgtgcaggcgctg
tgtggacgggccctcgtgtacctgacgctggaccagctgcaggacgctgtggacgacatt
atctctgctctcagacttgacccggggaccgtggtgcctgagatccgctctctgaggcca
gaagcccgggtgccgcttacacagggcctccactcccgctgccgggccctcctgagccag
cctctggacacgggagtctctctccgggacgaggacacccagggcctcctggcagtgggg
gaggcgctgaccaagatcgatgccacacagcccagctggcacctcctcctcgcagacatc
ctcatggtgctgggccgctacgaggaggcggacacctgcctgcagggagccccgcacccc
accccaccgtcagcggctgcccgggcccggcgaggcctgctcctgctcaggaggggagct
gtgcctgctgcagtccaggacctgcagggcctggccgaggtggacgcccaggacctgcac
ttcctgctgcatctcctgggggcctcggagcggcagagcatctcccaggtggcagcccag
gaagccagcatcctcctggacacagggcaccccaggcaggcactgggctactgctcgctg
gccgtccaggctggtggtagcaggacctgccacctgcgtctccggtctgcctgcctggct
gagctgcgggaatttgaccgggcactccaggacctggaccgagtgatccaggagggaacc
ggggccggtgacctgccagggagggcagaggacttctgctcccggggccgcctgctgctg
ggcctgggagatgaggagggggccgcagcagccttcgcccgggccctggcgctgtcaccc
gccccggcccaaagccgcctgtggaagcagccaggccaggcccccactgctggcacgttc
ctgcgtctcgggcagtgttgcctggagggacagcgccacggagaggcccggaccgtggcc
cagagcaggttcttggtgaaccccaaccacggcggactgaagaggccgaaggctcaaacc
cagaggacagtgtcctccggctgccggctgctctga
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