Sciurus carolinensis (gray squirrel): 124993424
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Entry
124993424 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: protein SON-like
KO
K23718
protein SON
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124993424
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124993424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
RSRP
DND1_DSRM
G-patch_2
Beta-prop_ACSF4
dsrm
Motif
Other DBs
NCBI-GeneID:
124993424
NCBI-ProteinID:
XP_047421206
LinkDB
All DBs
Position
9:130991770..131022364
Genome browser
AA seq
2411 aa
AA seq
DB search
MAADIEQVFRSFVVSKFREIQQELSSGRSEGQLNGETNTPIEGNQAGDAGASARSLPNEE
IVQKIEEVLSGVLDTELRYKPDLKEASRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKK
KKKEKEKKYKRQPEESESKPKSHHDGNIDLESDSFLKFDSEPSAMALEHPVRAFGLSESS
ESPTVMLEPPVVSMEVSEPHILETLKPVTKTAELSVGSSSVISEQSVAATLEPSATKILD
SFATATVPATTVVLKSSEPPVTSVEYQTKSVLKSLESTSPEPSKIKLVEPPVAKMQEPSE
TLVIASDVPTEVHPEPSTSTTVDFPESSATEVLRFPEQPVEVPSEIADSSMTRPQELLEL
SKTTALEMPESSVASALELPGPPATSKSELQGPPVTPVLELPGPSATPVPELSGPLSAPV
PELPGPPATAVPELPGPSVTPVPQLSQELPGPPAPSVGLEPPQEVPEPPVMAQELPGLPA
VSATVELPGQPAVTVAMELTEQPVTTTEFEQPVGMTTVEHPGHPEVTAATGLLGQPEATM
VLELPGQPVATTALELSGQPSVTGVPELPGLPSATRALELSGQSVAAGALELPGQLMATG
ALEFSGQSGAAGALELLGQPLATGVLELPGQPGAPELPGQPVATVALEISVQSVVTTSEL
STMTVSQSLEVPSTTALESYSTVAQELPATLVGETSVTVGVDPLMAQESHMLASNTMETH
MLASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLASSTMDSQMLATSSMDSQ
MLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSTMDSQ
MLATSTMDSQMLATSSMDSQMLASGTMDSQMLASGTMDAQMLASGTMDAQMLASSTQDSA
MLGSKSPDPYRLAQDPYRLAQDPYRLGHDPYRLGHDAYRLGQDPYRLGHDPYRLTPDPYR
MSPRPYRIAPRSYRIAPRPYRLAPRPLMLASRRSMMMSYAAERSMMSSYERSMMSYERSM
MSPMAERSMMSAYERSMMSAYERSMMSPMAERSMMSAYERSMMSAYERSMMSPMADRSMM
SMGADRSMMSSYSAADRSMMSSYSAADRSMMSSYTADRSMMSMAADSYTDSYTDTYTEAY
MVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPSEVSALPP
EECVSQTEPTVSQSEISEPPAVPADYSVSGSESSVLASEAVVTVPEPPLELESSVTSTPV
ESAVVAEEHESIPERPVTCMVSETPISAEPSMLTSEPPMTSETTETYDSMRAAGHVASEV
SMSLLESEPTESILELPGMAGPAPDVAGPEPPAMTGSEPPAVAVPEPPAMPELESPAVAV
PELPTIVEPEHVTIPVSVVSALEPSVPVLEPAVSFLQPAMIVSEPCVSVQESTVTFSESA
VTVSEQTQIISAEMALVSTPVIVGSNVSSHVMKGMNLSGDQSFSPDVGMQEIPLHSGEEP
HVEGHLKSDTYENEHGINTDLNINNHIIAKEMEHNTESAASTCPVGETGEEKILSINETK
QCTVLDICPGVSEADVGGALSSIGPLGLEPDTTETNKGIEFVTASALSSVSKYDEVSLTT
QDTEHDMVISSSPSGGSEADIEGPLPAKDIHLDLPSNNLVSKDTEEPLPMRESDQILAVA
LSPKESSGEDKEVPLSTKEIHSDSGFSANIDEINEADLVRPLLPKDMERLTSLRAGIEGP
LLASEAERDKSAASPIVTSVPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKE
KKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSR
SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAVRARSRTPSRRSRSHTPS
RRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP
SRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDK
AQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEKCKQIAQS
KEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTPPKSQVTLTKEF
PVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDNVFSSNLPSEPVDISTAMSERALAQK
RLSENAFDLEAMSMLNRAQERIDAWAQLNSIPGQFTGSTGVQVLTQEQLANTGAQAWIKK
DQFLRAAPVTGGMGAVLMRKMGWREGEGLGKNKEGNKEPILVDFKTDRKGLVAVGERAQK
RSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLRNGSPY
QPNCMFFLNRY
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacatcgagcaggtttttaggtctttcgtggtcagtaaattccgggaaatc
caacaggagctttccagtggaaggagtgaaggccagctgaatggtgaaacaaatacacct
attgaaggaaaccaggcaggtgatgcaggtgcctctgccaggagcctaccaaatgaagaa
atagtgcagaagatagaggaagtgctttctggggtcttagatacagaactacgatataag
ccagacttgaaagaagcctccagaaaaagtagatgtgtatctgtacaaacagatcctact
gatgaaattcccactaaaaagtcaaagaagcataaaaagcacaaaaacaaaaagaagaaa
aagaagaaagaaaaggaaaaaaagtacaaaagacagccagaagaatctgagtcaaaaccg
aaatctcatcatgatgggaacatagatttagagtctgattcctttttaaagtttgattct
gaaccttcagcaatggcactggagcatcctgtaagagcatttggcctatctgagtccagt
gaatcccctacagttatgctggaacctcctgtagtatcaatggaggtttcagagccacac
atcttagaaactctgaagccagttacaaaaactgcagaactctcagttggatcttcatca
gttatttcagagcagtctgtggcagcaacattggaaccgtctgcgacaaagattctggat
tcctttgcaacagcaacagtgcctgctacaacagtagtgctgaagtcatctgagccacct
gtaacgtcagtggagtatcagacgaagtctgtgctgaaatctttggagagcacctctcca
gagccatcaaagatcaagttggtagagcctccagtagcaaaaatgcaagagccatcagaa
acccttgtgatagcatcagacgtacctactgaggtgcaccccgaaccaagcacatcaaca
acagtggattttccagagtcatctgcaaccgaagtgctaagatttccagagcaacctgta
gaagtaccatcggagattgcagattcatcaatgacaagaccgcaggagttgctggagctg
tctaagaccacagcgttggagatgccggagtcgtcggtggcctcagcgctggagttgccg
gggccacctgcgacgtccaagtcggagttgcaggggcccccagtgactccagtgctggag
ttacctgggccctctgctaccccggtgccagagttgtcagggcccctttctgccccagtg
cctgagttgccagggccccctgcgactgcagtgcctgagttgccagggccctctgtgaca
ccagtgccacagttgtcgcaggaattgccagggcctccagcaccatccgtggggttggag
ccaccacaggaggtgccagagccacctgtgatggcacaggagttgccggggctgcctgca
gtgtcagcaacagtagagttgccagggcagcctgcggtaacagtagcaatggagttgacc
gaacaacctgtgacgacgacagaattcgagcagcctgtggggatgacaacggtggaacat
cctgggcatcctgaggtgacagcagcaacagggttgctggggcagcctgaggcaactatg
gtgctggagttgccgggacagccagtggcaacaacagcgctggagttgtctgggcagcct
tcggtgactggggtgccagagttgccagggctgccttcggcaactagggcactggagttg
tcggggcagtctgtggcagctggggcactagagttgcctgggcagctcatggcaactggg
gcactggagttctcagggcagtctggggcagctggagcactggagcttttggggcagcct
ctggcaacaggggtgcttgagttgcctgggcagcctggggcgccagagttgcctgggcaa
cctgtggcaactgtggcgctggagatctctgttcagtctgtggtgacaacatcggagctg
tcaacgatgaccgtgtcgcagtccctggaggtgccctcgacgacagcgctggaatcctac
agtacggtagcacaggagctgcctgctacattagtgggggagacttctgtaacagtagga
gtggatcccttgatggcccaggaatcccatatgttagcttctaacaccatggagacccat
atgttagcatccaacaccatggactcccagatgctagcgtccaacaccatggactcccag
atgctagcgtccaacaccatggactcccagatgttagcctctagcaccatggactcccag
atgttagcttctagcaccatggactcccagatgttagcaactagctccatggactcccag
atgttagcaaccagtactatggactcccagatgttagcaaccagctccatggactcccag
atgttagcaaccagctccatggactcccagatgttagcaaccagctccatggactcccag
atgttagcaaccagctccatggactcccagatgttagcaaccagcaccatggactcccag
atgttagcaaccagcaccatggactcccagatgttagcaactagttctatggattcccag
atgttagcatctggcactatggattctcaaatgttagcttctggcaccatggatgcccag
atgttagcatctggcaccatggatgcccagatgttagcctcaagtacccaagattctgcc
atgttgggttcaaaatctcctgatccctataggttagctcaggatccttacaggttagct
caagatccctataggttgggtcatgacccttataggttaggtcatgatgcttacaggtta
ggacaggacccctatagattaggccatgatccctacagactaactcctgatccctatagg
atgtcacctagaccctatagaatagcacccaggtcctatagaatagcacctaggccatat
aggttagcacctagacccctgatgttagcatctagacgttctatgatgatgtcctatgct
gcagaacgttccatgatgtcatcttatgaacgctctatgatgtcttatgagcggtctatg
atgtcccctatggctgagcgctctatgatgtcagcctatgagcgctctatgatgtcagcc
tatgagcgctctatgatgtctcctatggccgagcgctctatgatgtcagcctacgagcgc
tctatgatgtcagcttatgagcgctccatgatgtccccaatggctgatcgatctatgatg
tccatgggtgccgaccggtcgatgatgtcgtcatactctgctgctgaccggtcgatgatg
tcatcgtactctgcagctgaccgatctatgatgtcatcttacactgctgatcgttcaatg
atgtctatggcagctgattcttacactgattcttatactgatacatatacggaggcatat
atggtgccacctttgcctcctgaagagcctccaacaatgccaccattgcctcctgaggag
ccaccgatgacaccaccattgcctcctgaggaaccaccagagggtcctgcgttacccact
gagcagtcagcattaacagctgaaaatacttggccttcagaggtgtcagcattacctcct
gaagagtgtgtatcccaaactgagcctactgtgagtcaaagtgagatttcagagcctcca
gcagtgcctgctgattattcagtgtcaggatcagagtcctcggtgttagcatcagaggca
gttgtgactgttccagaacccccactagagttagagtcttcagttacatcaacacctgtt
gagtctgctgtagtagcagaagaacatgaaagtattccagagagaccagtgacttgtatg
gtatctgaaacacccatttcagctgaaccatctatgttaacatcagagcctcctatgaca
tcagagacaacagaaacatatgattccatgagagctgcaggacatgttgcctcagaggta
tccatgtccctgctggagtcagaaccaacagagagcattttggagctaccaggcatggct
ggcccagctcctgatgtggctggcccagagcctcccgctatgactggctcagagcctcct
gctgtggctgtcccagaaccaccagccatgcctgagttagaatcacccgctgtggctgtt
ccagagcttcccaccattgttgagccagagcatgttaccattcctgtgtcagttgtatct
gccctggagccttctgtgcctgtcctagaaccagcagtgtcattccttcaacctgctatg
attgtttcagaaccatgtgtttctgtccaggagtcaactgtgacattttcagagtctgct
gtcactgtttcagagcagactcaaataatatcagctgagatggctttagtgtctacacca
gtgatagtggggtctaatgtatcatcacatgttatgaaagggatgaatttatctggtgat
caaagtttttctccagatgttggcatgcaggagattccactgcattcaggtgaagaacca
catgtggaaggacacttgaaaagtgacacttatgaaaatgaacatggtataaatacagac
ctaaatataaataatcatataattgctaaagaaatggaacataatacagagtctgctgct
agcacctgtcctgttggtgaaactggtgaagagaaaattttgtccatcaatgaaactaaa
caatgcacagtattggatatctgccctggtgttagtgaagctgatgtaggaggagcacta
tcttctattggtcctcttggtctggaacctgatacaacagaaactaataagggtattgag
tttgtgacagcatctgctctcagttcagttagtaaatatgatgaagtatctttaactact
caagatactgaacatgacatggtaatttccagcagccccagtggtggtagtgaagctgac
atagagggacctttacctgctaaagacattcatcttgatttaccatctaataatcttgtt
agtaaggatacagaagaaccattacctatgagagagagtgaccagatattagcagttgct
ctcagccctaaagaaagtagtggagaagataaagaagtacctctctctactaaagagata
cattctgattcaggattttctgctaacattgatgaaattaatgaagcagatttagtgaga
ccattacttcctaaggacatggaacgtcttacaagccttagagctggtattgaaggacct
ttacttgcaagtgaagctgaacgtgataaatctgctgccagtccaattgtaaccagtgta
ccagaaagggcttcagagtcgtcttcagaggaaaaagatgattatgaaatttttgtaaaa
gttaaggacacacatgaaaaaagcaagaaaaataagaaccgggacaaaggtgaaaaagag
aaaaaaagagactcttcattaaggtctcggagtaagcgttccaagtcttctgaacacaag
tcccgcaagcgtaccagtgagtctcgttctcgggcaaggaaaagatcatctaagtccaag
tctcatcgatctcaaacacgttcacggtcacgttcaagacgcaggaggaggagcagcaga
tcaaggtcaaagtctagagggaggcgatctgtatcaaaagagaagcgcaaaagatctcca
aagcacagatctaagtccagggaaagaaaaagaaaaagatcaagctctagggataatcga
aaagcagttagagctcgaagtcgaaccccaagtcgtcggagtaggagccatactcctagt
cgtcgaagaaggtctagatctgtgggtagaaggaggagttttagcatttcccccagccga
aggagccgcacacccagccgaaggagccgcacacccagccgaaggagccgcacacccagc
cgaaggagccgtacccccagccgaaggagccgcacccccagccgaaggagccgcactccc
agccgtcggagaagatcaaggtctgtggtaagaagacgaagctttagtatatcaccagtc
agattaaggcgatcaagaacacccttgagaagaagatttagtagatctcccatccgtcgt
aagagatccaggtcttctgaaagaggaagatcacccaaacgtctgacagatttggataag
gctcagttacttgaaatagccaaagctaatgcagctgccatgtgtgctaaggctggtgtt
cctttgccgccaaacctaaagcctgcacctccacctacaatagaagagaaagttgctaaa
aagtcaggaggagctactatagaagaactaactgagaaatgcaaacagattgcacagagt
aaagaagatgatgatgtaatagtgaataaacctcacgtttcggatgaagaggaagaagaa
cctcctttttatcatcatccttttaaactcagtgaacccaagcccatttttttcaatctg
aatattgctgcagcaaagccaactccgccaaaaagtcaggtaacactgacaaaagaattt
cctgtatcatctggatctcagcatcgaaaaaaggaagcagatagtgtttatggagagtgg
gttcctgtagagaaaaatggtgaagaaaacaaagatgatgataatgttttcagcagcaat
ttgccctcagagcctgtggacatctctacagcaatgagcgaacgggcacttgctcagaaa
agactcagtgagaatgcatttgaccttgaagccatgagcatgttaaatcgagctcaagaa
cggattgatgcctgggctcagctgaactctattcctggacagttcactggaagtacagga
gtacaggttctgacacaagaacagttggccaatactggtgcccaagcctggattaaaaag
gatcagttcttaagagcagccccggtaactggaggaatgggagccgttttgatgagaaaa
atgggctggagagaaggagaaggattaggaaaaaacaaagaaggaaataaggaacctatc
ctagttgattttaagacagaccgaaaaggtcttgttgcagtaggagaaagagcacaaaag
aggtctgggaatttctctgctgcaatgaaagatctgtcaggcaaacatcctgtatctgcc
ttgatggaaatttgtaataagagaaggtggcaaccacctgaatttcttttggtccatgat
agtggccctgatcatcgcaaacattttctctttagggtattgagaaatggaagcccttac
cagcccaattgtatgtttttcttgaataggtattga
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integrated database retrieval system
