Sciurus carolinensis (gray squirrel): 124993777 Help Entry 124993777         CDS       T08117                                  Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04151   PI3K-Akt signaling pathway ncar04510   Focal adhesion ncar04512   ECM-receptor interaction ncar04518   Integrin signaling ncar04820   Cytoskeleton in muscle cells ncar04974   Protein digestion and absorption ncar05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124993777   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124993777    04518 Integrin signaling     124993777  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124993777   09142 Cell motility    04820 Cytoskeleton in muscle cells     124993777  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124993777  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     124993777  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ncar04147]     124993777    00536 Glycosaminoglycan binding proteins [BR:ncar00536]     124993777 Exosome [BR:ncar04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    124993777 Glycosaminoglycan binding proteins [BR:ncar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124993777  Hyaluronan   Extracellular matrix or blood plasma proteins    124993777 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 Motif Other DBs NCBI-GeneID:  124993777 NCBI-ProteinID:  XP_047421506 LinkDB All DBs Position 9:140913881..140945402 Genome browser AA seq 1195 aa AA seqDB search MRNPRKKGVGQKHVDVMVGETVSLEDPLEFLNMRSGISHERAQSLLKLAWALMDLSNEVA RGRVWPGQLSSPAPQGQEQVCPGEDQGPLCRKARPQLVGREPHSRRPPSPGSGARRSHDS AGRPAPAPPSSLPVLVLPAAEEDGPPLLTVQAPPLSWPSLSGAPGRCRLRLAGALLTLLL QACRVTAQDVPEASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVDKVKAFTKRFIDN LRDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDELKASVDAVKYFGKGTYTDCA IKKGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAKHLGIKVFSVAIT PDHLEPRLSIIATDHTYRRNFTAADWGQSRGAEEAISQTIDTIVDMIKNNVEQVCCSFEC QPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGS RGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGAQGPPGPKGDAGAFGLKGE KGAAGADGEAGRPGNSGPPGDEGQPGEPGPPGEKGEAGDEGNAGPDGPPGERGGPGERGP RGTPGVRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGLRGA PGPAGPPGDPGLMGQRGEDGPPGNGTEGFPGFPGYPGSRGPPGLNGTKGYPGLKGDEGEA GDPGEDNNDIAPRGVKGAKGHRGPEGPQGPPGNTGPPGPDECEILDIIMKMCSCCECKCG PIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSKDELVKFEPGQSHAGVVQYSHNQMQE HVDLRSPHVRNAQEFKEAVKKLQWMAGGTFTGEALQYTRDRLLPPTQNNRIALVITDGRS DTQRDTTPLSVLCGPDIQVVSVGIKDVFGFVASSDQLNVISCQGLASPGRPGISLEKENY AELLDDAFLKNITAQICIDKKCPDYTCPVTFSSAADITILLDGSASVGSHNFDTTKRFAK RLAERFLSAGREDPSQDVRVAVVQYSGPGQQRPGRGALQFLQNYTVLANVVDGMDYFNDA TDVNDALSYVTRFYRETSPGTAKKKVLLFSDGNSQGATAAAIEKAVQEAQRAGIEVFVVV VGHQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFPQTVSRKVAQS NT seq 3588 nt NT seq  +upstreamnt  +downstreamnt atgaggaacccaaggaagaagggtgttggccagaagcatgtagatgtcatggtgggtgag actgtaagcctggaggacccactggagttcctgaatatgcgtagtgggatcagtcatgaa cgagcccaatctcttctcaagctggcctgggccctgatggacctgagcaacgaggtggcc cggggtcgggtgtggccagggcagctctccagcccagcaccacagggtcaggagcaggtc tgtccaggcgaggaccagggtccactgtgcaggaaagcaaggccgcagctggtgggacgg gaaccccacagccggcggccgccttccccaggctctggagccaggcggagccatgactca gccggccgccccgcccccgcccctccctcctccctcccggtcctggtcctgcccgcggcc gaggaagacggccctcctctgctgaccgtccaggccccacccttatcgtggccctcgctc agtggtgctccaggccggtgcagactgaggctggccggtgccctgctgaccctgctgctg caggcctgccgggtgaccgcccaggacgttccggaggcctcgagggccatcgccttccaa gactgccccgtggacctgttctttgtgctggacacctctgagagcgtggccctgaggctg aagccctatggggccctggtggacaaggtgaaggccttcaccaagcgcttcatcgacaac ctgagagacaggtactaccggtgtgaccgcaacctggtgtggaacgcgggcgccctgcac tacagcgacgaggtggagatcatccgcgggctcacgcgcatgcccagcgggcgcgacgag ctcaaggccagcgtggacgccgtcaagtacttcggcaagggcacctacaccgactgcgcc atcaagaaggggctggaggagctgctcatcgggggctcccacctgaaggagaacaagtac ctgatcgtggtgaccgacgggcaccctctggagggctacaaggagccgtgcgggggcctg gaggatgcggtgaacgaggcaaagcacctgggcatcaaggtcttctccgtggccatcaca cccgaccacctggagccgcgcctgagcatcatcgccacggaccacacgtaccggcgcaac ttcacggcggcagactggggacagagccgcggcgcggaggaggccatcagtcagaccatc gacaccatcgtggacatgataaaaaacaacgtggagcaagtgtgctgctccttcgagtgc cagcctgcccgaggaccgccagggccccggggcgaccctgggtacgagggggaacgaggc aagccaggcctacccggagagaagggagaagccggagaccccggacgaccgggtgacctc gggccagtcgggtaccaggggatgaagggagaaaaagggagccgcggggagaagggctcc aggggacccaagggctacaagggcgagaagggcaagcgaggcatcgacggggtggatggc atgaagggggagacggggtacccaggcctgccgggctgcaagggctcccccggctttgat ggtgctcaagggccccctggccccaagggagatgctggcgccttcggcctgaagggagag aagggtgcagctggagccgatggggaggctgggagacccgggaactcaggaccacccgga gacgagggccagccgggagagcccggtccccccggagagaagggagaggccggcgacgag gggaacgcaggaccagacggcccccctggagagaggggcggccctggagaaagaggacct cgggggaccccaggtgtgcgaggaccaagaggagacccgggcgaagctggaccccaaggc gaccaaggaagagaaggccccgtgggcgtccccggagacccgggtgaggccggccccatc ggacccaagggataccgaggtgacgagggtccaccagggtctgagggtctcagaggagcc ccaggacccgccgggcccccaggagacccggggctgatgggccaaaggggtgaagacggc ccccctggcaacggcaccgagggcttccccggcttccccggctatccaggcagcaggggc ccccccgggctgaatggcacaaaaggctacccaggcctcaagggggacgagggtgaagct ggggaccctggagaggataacaacgacatcgcacctcgcggggtcaaaggggcaaagggg caccgaggcccagagggcccgcagggacctccaggaaacacaggaccacctgggccagac gaatgcgagattttggacatcatcatgaaaatgtgctcctgctgcgaatgcaagtgcggc cccatcgacatcctcttcgtgctggacagctcggagagcatcggcctgcagaactttgag attgccaaggacttcattatcaaggtcattgaccgactgagcaaggacgagctggtcaag ttcgagcccgggcagtcgcacgccggcgtcgtgcagtacagccacaaccagatgcaggag cacgtggacctgcgcagcccccacgtccgcaacgcccaggagttcaaggaagccgtcaag aagctgcagtggatggcaggcggcaccttcacaggcgaggccctgcagtacacccgggac cggctgctgccgcccacccagaacaaccgcatcgccctggtcatcaccgacgggcgctcg gacacccagagggataccactccgctcagcgtgctctgcggccccgacatccaggtggtc tccgtgggcatcaaggacgtgtttggcttcgtcgcgagctccgaccagctcaatgtcatt tcctgccaaggcctggcatcccccgggcggccgggcatctccctggagaaggaaaactac gcagagctgctggacgatgccttcctgaaaaacatcacggcccagatatgcatagacaag aagtgtccagactacacctgcccagtcacgttctcctccgctgccgacatcaccatcctg ttggacggctcggccagcgtgggcagccacaacttcgacaccaccaagcgcttcgccaag cgcctggctgagcgcttcctgtccgccggccgggaggacccttcacaggacgtgcgggtg gcggtggtgcagtacagcggccctggccagcagaggccggggcggggtgccctgcagttc ctgcagaactacacagtgctggccaacgtggtggacggcatggactacttcaacgatgcc accgatgtcaacgacgccctgagctacgtcacgcgcttctaccgggagacctcgccggga acggccaagaagaaggtgctgctgttctccgacggtaactcgcagggggccacggcggcg gccatcgagaaggcggtgcaggaggcccagcgggcgggcatcgaggtcttcgtggtggtg gtgggtcaccaggtgaacgagccccacatccgtgtgctggtcaccggcaagactgctgag tatgacgtggcctttggcgagcgccacctgttccgcgtgcccagctaccaggccctgcta cggggcgtcttcccgcagacggtgtccaggaaggtggcgcagagctag

DBGET integrated database retrieval system