Sciurus carolinensis (gray squirrel): 124993802
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Entry
124993802 CDS
T08117
Name
(RefSeq) transforming growth factor beta activator LRRC33-like isoform X1
KO
K26317
transforming growth factor beta activator LRRC33
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124993802
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
124993802
NCBI-ProteinID:
XP_047421549
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Position
9:complement(66632017..66658472)
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AA seq
726 aa
AA seq
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MRPAAPPGPGGAVSISCTRDLPARSHRPTSAALEMELLPLWLCLGFHFLTMKWKNGSGMV
TVASQGGCKLVGGVADCRGQNLASVPSSLPPHSQTLILDANPLKTLWNHSLQPYPLLESL
SLHSCHLGLIGLDAFQEQGHLHSLALADNCLSENYKETAAALHTLPDLRRLDLSGNSLTE
DMAALMLQNLSSLEAVSLARNTLMRLDDCVFEGLEHLRELDLQRNYIFEIEGGAFDGLTE
LRRLNLAYNNLPCVVDFGLTQLQFLNISYNVLEWFLAAKEEAAFELEMLDLSHNQLLFFP
LLPQCSKLHTLLLQDNNMGFYRDLYNTSSPQEMVAQFLLVDGNVTNITTVSLWEEFASSD
LAALHFLDMSQNQFQYLPDGFLKKMPSLSHLNLNQNCLMMLHIREHEPPAALTELDLSHN
QLSELHLAPGLTSCLRSLRLFNLSSNQLQGVPTDLFANASNITTIDMSHNQILLCPQPAP
IDRAGPPSCVDFRNMASLRSLSLEGCGLGALQDCPFQGTSLTHLDLSGNWGILNGSIAPL
QDIAPTLQVLSLRNVGLNSGFAELDFSGFGNLRDLDLSGNSLTSFPRFRSSLPLQTLDLR
RNSLTALPQRAVSEQLLRSLQTIYLSQNPYDCCGVEGWGALQHLKSVADLAMVTCNLSSK
VIRVLELQGGMPQDCKWERVDMGLLYLVLILPSCLTLLVACTVIFLTFKKPLLQVIKSRC
HWSSIY
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgcggcgccgcctgggcctgggggagccgtgagtatttcctgcacccgggac
ctcccggcccgcagccaccgccctactagtgctgcccttgagatggagttgctgcccctt
tggctctgcctgggttttcatttcttgaccatgaaatggaagaatggaagtgggatggtc
acagtagcttcccaagggggctgcaagttggtgggtggagttgctgactgcagagggcag
aaccttgcttcagtgcccagcagcctcccaccccactcacagacactcatcctggatgcc
aaccctctcaagaccctgtggaatcattccctccagccttatcctctcctggagagcctc
agcctgcacagttgccacctgggactcatcggccttgacgccttccaggagcaaggccac
ctgcacagtctggctctggctgacaattgcctctctgagaactacaaggagacagcagct
gctctccacaccctgccagatttgcggaggcttgatttgtcaggaaactccttaacagaa
gacatggcagctctcatgctccagaacctctcctcactggaggctgtgtccctggcaagg
aacaccctgatgaggcttgatgactgtgtctttgagggcctggagcacctcagggaactg
gatttgcagaggaactatatctttgagattgagggtggtgcttttgatggcttgactgag
cttagacgcctcaacttggcctacaacaacctcccctgtgttgtggactttggcctcaca
cagctgcagtttctcaacatcagctacaatgtcctggagtggttcctagcagccaaggag
gaggctgcctttgagctggaaatgctggacctgtctcacaaccaactgctgtttttccct
ctcctaccccagtgcagtaagttgcacactctcctgctacaggacaacaacatgggcttc
tacagggacttgtacaacacctcatcgccacaggagatggtggcccagttcctccttgtg
gatggcaacgtgaccaatatcaccactgtcagcctctgggaagagtttgcctccagtgac
ctggcagctcttcacttcctggacatgagccagaaccagttccagtacctcccagatggc
ttcctgaagaaaatgccttccctctcccacctgaacctcaaccagaactgcctgatgatg
ctccacatccgggagcatgagcccccagcagcactcacagaactggatctgagtcacaac
cagctctcagagctgcacttggctccagggctcaccagctgtctgaggagcctccgcttg
ttcaacctgagctccaaccagctccagggtgtccccactgacctttttgccaatgccagt
aacatcactacaattgacatgagccacaatcagatcttactttgtccccagccagctccc
atagatagggcagggcctcccagctgtgtggatttccgaaatatggcatctttaaggagc
ctctctctggagggctgtgggctgggagcattacaagactgcccatttcaaggaacctcc
cttactcacttagacctatccggcaactgggggattctgaatgggagcattgcccctctc
caggatattgctcccaccttacaggtcctatctctcaggaatgtgggcctcaattctggc
ttcgcagaattggacttttctggatttgggaatctgagggacttggatctgtcaggaaat
tccttgactagcttcccgaggttcaggagcagtctgcccctgcagaccctggatctccgc
agaaactctctcactgcccttcctcagagggctgtgtctgaacagctcctgaggagtctg
cagaccatctacctcagtcagaatccatatgactgctgtggagtggagggatggggggcc
ctgcagcacctaaagtccgtcgccgacttggccatggtcacttgcaacctctcctccaag
gtcattcgcgtgctggagctgcagggcggcatgcctcaggactgcaagtgggagcgggta
gacatgggcctgctctaccttgtgcttattctccccagctgcctcaccctattggtggcc
tgcactgtgatcttcctcacttttaagaagcctttgcttcaggtaatcaagagtcgctgc
cactggtcctccatatactga
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