Sciurus carolinensis (gray squirrel): 124994081
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Entry
124994081 CDS
T08117
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124994081
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124994081
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GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124994081
NCBI-ProteinID:
XP_047421726
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Position
10:140118876..140122396
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AA seq
448 aa
AA seq
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MSVSGAAAPGDVPALPPPPPPPPPGPGPGPAPPAPAAASRDAMDGRAELPAFPRAGVPPL
AASDTVPAGPEAAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCA
PAPCAPAPAASGRPPRAEELERQALAAAGGVGAATGAEPPSAGDPYKADEVEANGYSSGG
GHSPSADSGDEAPDDEDEEEAPEAQAARGAEEARGGGGGLGARGSGCPGAAEAQAPPSAV
DDAAAPGPRGNSPGASGPPGAAAAAGIAATTPQGAVAAAAKPKRKRTGSDSKSGKPRRAR
TAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADT
SAPTGGGGGPGPGAGPGAGLPGGLSPLSPSPPMGAPLAMHGAAGYPAHGPGGLVCAAQLP
FLSSPAVLSPFVLGSQTYGAPAFYAPHL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagcggcgcggcagctcctggggacgtccccgcgctgccgccgccgccgccg
ccgccgccgcccgggcccggtccggggcccgcgccgcccgctcccgccgcagcttcccgg
gacgctatggacgggcgcgccgagctgcctgcctttccccgggccggagtccctccgctc
gcagccagcgacaccgtgcccgcggggcccgaggctgctggagcggcccggcccgccgcg
cccccgcgccccacctccttctcggtgctggacatactggaccccaacaagttcaacagc
aggagacgccgctgcgtgctgctgggtcccgtagcgcctgccgcgtgcgccccgtgcgcc
ccggccccgtgcgccccggcccccgccgcctcgggacgcccgccgcgcgcggaggagctg
gagcgccaagctctggccgccgccgggggagttggagcagccaccggagccgagccacca
agtgccggtgacccctacaaagcggatgaggtggaggccaacggctacagcagcggcggc
gggcacagcccgagcgctgacagcggggacgaggcgccggacgacgaggacgaggaggag
gcaccggaggcgcaggcggcgcgcggcgcggaggaggcgcgcggaggcggcggcggcctc
ggggcccgcgggtcgggctgcccaggagcggccgaggcgcaggcgccccccagcgcagtc
gacgacgcggcagccccggggccccgcgggaactcgccgggagcctcgggcccgccggga
gccgcggcggcggcggggatcgcggcgaccacgccgcagggcgcggtggcggcggcggcc
aagcccaagcggaagcgcacgggctccgactccaagtcggggaaaccgcggcgtgcgcgc
accgccttcacctacgagcagctcgtggcgctggagaacaagttcaaggcgacgcgctac
ctgtccgtgtgcgagcgcctcaacctggcgctgtccctgagcctcaccgaaacgcaggtg
aagatctggttccagaaccgccgaaccaagtggaagaagcaaaacccgggcgccgacaca
agcgcgccgaccggcggcggcgggggcccgggccccggcgcaggccccggtgcggggctg
cctggcggcctcagcccgctcagcccctcgccgcctatgggcgcgccgctcgccatgcac
ggcgccgccgggtaccctgcgcacggtcccggcgggctggtgtgcgccgcgcagctgccc
ttcctgtcgagccccgcggtgctctcgcccttcgtgctgggctcgcagacctacggcgcg
cccgccttctacgcgccgcacctctga
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