Sciurus carolinensis (gray squirrel): 124994095
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Entry
124994095 CDS
T08117
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124994095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124994095
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124994095
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124994095
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
124994095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
124994095
NCBI-ProteinID:
XP_047421747
LinkDB
All DBs
Position
10:108512887..108657666
Genome browser
AA seq
1337 aa
AA seq
DB search
MDFTAQPKPATALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSE
DEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFI
TRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHN
KKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIE
ACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERL
AVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKD
LTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMM
GLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLET
EERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM
TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANP
KQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGL
ELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTL
IPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVSL
GHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIK
LLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLA
QEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDP
VKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQD
VDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCD
VALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPTGV
LGAVNKPLSATGRKPYVRSTGTETGSNINVNSELNPSTGNRSREQSSEATETGISENEEN
PVRIISVTPVKNIDPVKNKEINSDQATQGNISSDRGKKRTVTAAGAENIQQKADEKVDES
GPPAPSKPRRGRRPKSESQGNATKNDDINKPTSKGRKRAAVSQESPGGLEAGNAKAPKLQ
DVAKKAGPAERQIDLQR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaccgcgcagcccaagcctgccactgccctctgtggcgtcgtgagtgccgac
gggaagatcgcttaccctccgggagtaaaggagatcaccgacaagatcaccaccgacgaa
atgatcaaacgactgaagatggtagtcaagacctttatggatatggatcaggactcagaa
gatgaaaaacagcagtatctcccactagccttgcatcttgcatctgaattcttcctcagg
aaccctaataaagatgtgcgtctcctcgtagcatgttgtttggctgacatatttcgaatc
tatgccccagaagctccatatacttcccacgataaacttaaggacatatttttgtttatt
accagacaattaaaaggtttggaggatacaaagagtccgcagtttaacagatatttttat
ttattagagaatttagcttgggttaaatcatataacatctgttttgaattggaagattgc
aatgaaatttttatccagctttttaggactctcttctctgtgatcaacaatagccacaat
aagaaggtacaaatgcatatgctagacttgatgagttctatcatcatggaaggtgatgga
gttactcaagaattattggactccattcttattaacctcatacctgcacataagaattta
aacaaacagtccttcgaccttgcaaaagtcctattgaaaaggacagtccagactattgag
gcatgcattgccaattttttcaatcaagtcctggtgctgggaagatcgtcagtaagtgat
ttgtcagaacatgtatttgatctgattcaggaactttttgctatagatcctcatttatta
ttgtctgtcatgccgcaacttgaattcaaattgaagagcaatgatggagaagaacgatta
gctgttgttcgacttctagctaaattatttggatctaaagattctgatttagccacacag
aatcgacctctttggcaatgttttcttggacgatttaatgacattcatgttcctgtgaga
ttagaaagtgtgaaatttgccagtcattgtttaatgaatcacccagatttagcaaaagat
ctcacagaatatttgaaagttagatcacatgatccagaagaagctattcgtcatgatgtc
attgttactataataacagcagccaaaagagaccttgccttagtaaatgatcagctactt
ggatttgtaagggaaagaacactggataaacggtggcgagtaagaaaagaagctatgatg
ggtctggctcagctttataagaaatactgtcttcatggtgaagcaggaaaggaagctgca
gagaaagtcagctggataaaggacaaacttttgcatatttattatcagaacagcattgat
gacaaactattggtagagaaaatttttgctcagtatcttgtgccccacaatctggaaaca
gaagagagaatgaaatgcttatattatttatatgctagtttggatccaaatgctgtaaaa
gctctcaatgaaatgtggaaatgtcagaacatgcttcgaagtcatgtacgcgaactattg
gatttgcacaagcagcctacgtcagaggctaactgttctgccatgtttggaaaactgatg
accatagcaaagaatttacctgatcctgggaaagctcaagattttgtgaagaaatttaac
caggttcttggtgatgatgagaaactacggtctcagttggagttattaatcagcccaacc
tgttcttgcaaacaagcagacgtttgtgtgagagaaatagctcggaaacttgcaaatcct
aagcaaccaacaaatccttttctagagatggtcaaatttcttttggaaagaattgcacct
gtgcacattgattcggaagccataagtgcactagtaaaattgatgaataaatcaatagag
ggaacagcagatgatgaagaggagggtgtaagtccagatacagctattcgttcaggactt
gaacttcttaaggttctgtctttcacacatcctacctcgttccactctgcagagacatat
gagtccttgttacagtgcctaagaatggaggatgataaggtagcagaagctgcaatacaa
atttttagaaatacaggccacaaaatagaaacagaccttccccagatacgatcgacctta
attcctattttacatcaaaaagcaaagaggggtactccacaccaagcaaaacaggctgtg
cactgtatacatgccattttcacaaataaagaagtccagcttgcacagatttttgagcca
ctcagtagaagtctgaatgctgatgtaccagaacaacttataactccattagtttcactg
ggccacatttctatgttagcaccagatcagtttgcttccccaatgaaatctgtagtagca
aattttattgtgaaagatctactaatgaatgacaggtcaacaggcgagaagaatggaaaa
ttgtggtctccagatgaagaggtttcccctgaagtactagcaaaggtacaggcaattaaa
cttctggtaaggtggctgttgggtatgaaaaacaaccaatctaaatcagccaattcaact
cttcggttattatcggcgatgttggttagtgagggtgacctgacagagcaaaaaaggatc
agtaaatctgatatgtctcgcttgcgattagctgctggtagtgccataatgaagcttgct
caggaaccttgttaccatgaaattattactccagaacaatttcaactctgtgcacttgtt
attaatgatgagtgttaccaagtaaggcagatatttgctcagaagctacataaggctctt
gtaaagttactgctcccattggagtacatggcgatctttgccttgtgtgccaaagatcct
gtgaaggagagaagagcacatgcacgacagtgtttactaaaaaacatcagtatacgcagg
gagtacattaaacagaacccgatggctactgagaaattattatcactgttgcctgaatat
gtagttccatacatgattcacctgctagcccatgatccagattttacaagatcacaagat
gttgatcagcttcgtgatatcaaagagtgcctgtggttcatgcttgaagttttaatgaca
aagaatgaaaataatagccatgcctttatgaagaagatggcagagaacatcaagctaacc
agggatgcccagtctccagatgaatccaagacaaatgaaaaactttatacagtgtgtgat
gtggctctgtgtgttataaatagtaaaagtgctttgtgcaatgcagattcaccaaaggac
ccagtcctcccaatgaaattttttacacaacctgaaaaggacttctgtaatgacaagagt
tatatttcagaagagacaagagtacttctgttaacaggaaagccaaagcccactggagta
ctgggtgcggtaaataagcctttatcagcaacaggaaggaaaccctatgttagaagcact
ggcactgagaccggaagcaatattaatgtaaattcagaactgaatccctcaactggaaat
cgatcaagggaacagagttcagaggctacagaaactggaattagcgaaaatgaggagaac
cctgtgagaattatttctgtaacacctgtaaaaaacattgatccagtaaaaaataaggaa
ataaattctgatcaggctacccagggcaatatcagcagtgaccgaggaaagaaaagaaca
gtaacagcagctggtgcagagaatattcaacaaaaagcagatgagaaagtagatgaatca
gggccacctgccccttccaaacccaggagaggacgtcgacccaagtctgaatctcagggc
aatgcaaccaaaaacgatgatataaataaacccacaagtaagggaaggaaaagagctgca
gtcagtcaagagagccctgggggtttggaagcaggtaatgccaaagcacccaaactgcaa
gatgtagccaaaaaggcgggaccagcggagagacagattgacttacaaaggtaa
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