Sciurus carolinensis (gray squirrel): 124994221
Help
Entry
124994221 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124994221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124994221
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124994221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
124994221
NCBI-ProteinID:
XP_047421966
LinkDB
All DBs
Position
10:complement(67964190..67969549)
Genome browser
AA seq
409 aa
AA seq
DB search
MSRVPSPPPPTEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
XAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMTDDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHNADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYGSLASAQ
SSWLDKAQRHTLTLHRSTLAGVHGGGRRRSVSVTPAAAAVWTQLSAPRL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttccaagtcctccacctccgacagaaatgtcgagtggccctgtagctgag
agctggtgctacacacagatcaaggtagtgaaattctcctacatgtggaccattaataac
tttagcttttgccgagaggaaatgggtgaagtcattaaaagttcaaccttttcatcagga
gccaatgataaactgaaatggtgtttgagagtaaacccaaaagggctagatgaagaaagc
aaagattacctgtcactttacctgttactggtcagctgtccaaagagtgaagttcgggca
aaattcaaattctccatcctgaatgccaagggagaagaaaccaaagctatggagagtcaa
tgagcttataggtttgtgcaaggcaaggactggggattcaaaaaattcatccgtagagat
tttcttttggatgaggctaacggacttctcccagatgacaagcttaccctcttttgcgag
gtgagtgtggtacaagattccgtaaacatttctggccagaataccatgaatatggtgaag
gttcctgaatgccggttggcagatgagttaggagggctgtgggagaattcccggttcaca
gactgctgcctgtgtgttgctggccaggaattccaggctcataaagctatcttagcagca
cgttctccagtttttagtgccatgtttgaacatgaaatggaagagagcaaaaagaatcgg
gttgaaatcaatgatgtggagcctgaagtttttaaggagatgatgtgcttcatttacacg
gggaaggctccaaatcttgataaaatgactgatgatttgctggcagctgctgacaagtat
gccctggagcgtttaaaggtcatgtgtgaggatgccctctgcagtaacctctccgtggag
aatgccgcagaaattctcatcctggctgacctccacaatgcagatcagttgaaaactcag
gcagtggatttcatcaactatcatgcttcggatgtcttggagacctctggatggaagtca
atggttgtgtcacatccccacttggtggctgaagcatatggctctctggcttcagcacag
tcttcgtggctggataaggcccagaggcacaccctgaccctccataggtcaacgctggcc
ggcgtccatggaggcggaaggcgacgctcggtcagtgttaccccagcggcagcagctgtc
tggacacaactgtcggcccccaggctgtga
DBGET
integrated database retrieval system
