Sciurus carolinensis (gray squirrel): 124994230
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Entry
124994230 CDS
T08117
Name
(RefSeq) WD repeat and FYVE domain-containing protein 3
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124994230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124994230
Membrane trafficking [BR:
ncar04131
]
Autophagy
Aggrephagy
Scaffold proteins
124994230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
Arm_4
PH_BEACH
DUF4704
Laminin_G_3
DUF4800
E3_UbLigase_R4
DUF1088
Motif
Other DBs
NCBI-GeneID:
124994230
NCBI-ProteinID:
XP_047421971
LinkDB
All DBs
Position
10:71274969..71515527
Genome browser
AA seq
3086 aa
AA seq
DB search
MNMVKRIMGRPRQEECSPQDNALGLMHLRRLFTELCHPPRHMTQKEQEEKLYMMLPVFNR
VFGNAPPNTMTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEKQCTLPPSRDFRATTPSE
AASRAIVQFLEINQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYLFFD
LPHVPEAVGGAQNELPLAERRGLLQKVFVQILVKLCSFVSPAEELAQKDDLQLLFSAITS
WCPPYNLPWRKSAGEVLMTISRHGLSVNVVKYIHEKECLSTCVQNMQQSDDLSPLEIVEM
FAGLSCFLKDSSDVSQTLLDDFRIWQGYNFLCDLLLRLEQAKEAESKDALKDLVNLITSL
TTYGVSELKPAGITTGAPFLLPGFAVPQPAGKGHSVRNIQAFAVLQNAFLKAKTNFLAQI
ILDAITNIYMADSANYFILESQHTLSQFAEKISKLPEVQNKYFEMLEFVVFSLNYIPCKE
LISVSILLKSSSSYHCSIIAMKTLLKFTRHDYIFKDVFREVGLLEVMVNLLHKYAALLKD
PTQAPDEQGDSRNNSSVEDQKHLALLVMETLTVLLQGSNTNAGIFREFGGARCAHNIVKY
PQCRQHALMTIQQLVLSPNGDDDMGTLLGLMHSAPPTELQLKTDILRALLSVLRESHRSR
TVFRKVGGFVYITSLLVAMERSLSSPPKNGWEKVNQNQVFELLHTVFCTLTAAMRYEPAN
SHFFKTEIQYEKLADAVRFLGCFSDLRKISAMNVFPSNTQPFQRLLEEDAVSVDSVSPTL
RHCSKLFIYLYKVATDSFDSRAEQIPPCLTSESSLPSPWGTPALSRKRHAYHSVSTPPVC
PAKNVADLKLHVAASSLQSSDAVIIHPGAMLAMLDLLASVGSVTQPEHALDLQLAVANIL
QSLVHTERNQQVMCEAGLHARLLQRCSAALADEDHSLHPPLQRMFERLASQALEPMVLRE
FLRLASPLNCGAWDKKLLKQYRVHKPSSLCYEPEMRNSMITSMEGLGSDSVFSLPEDNHY
RISKSLVKSAEGSTVPLTRVKCLVSMTTPHDIRLHGSSVTPAFVEFDTSLEGFGCLFLPS
LAPHNAPTNNAVTTCLNDGAVVSGIGSGERFFPPPSGLSYSSWFCIEHFSSPPNNHPVRL
LTIVRRANSSEQHYVCLAIVLSAKDRSLIVSTKEELLQNYVDDFSEESSFYEILPCCARF
RCGELIVEGQWHHLVLVMSKGMLKNSTAALYIDGQLVNTVKLHYVHSTPGGSGSVNPPVV
STVYAYIGTPPAQRQIASLVWRLGPTHFLEEVLPPSNITTIYELGPNYVGSFQAVCMPCK
DAKSEGVVPSPVSLVPEEKVSFGLYALSVSSLTVARIRKVYNKLDSKAIAKQLGISSHEN
ATPVKLIHNSAGHLNGPARTIGATLIGYLGVRTFVPKPVATTLQYIGGAAAILGLVAMAS
DVEGLYAAVKALVCVVKSNPLASKEMERIKGYQLLAMLLKKKRSLLNSHILHLTFSLVGT
VDSGHETSIIPNSTAFQDLLCDFEVWLHAPYELHLSLFEHFIELLTESSEASKNAKLMRE
FQLIPKLLLTLRDMSLSQPTIAAISNVLSFLLQGFPNSNDLLRFGQFISSTLPTFAVCEK
FVVMEINNEEKLDMGTEEEFGGLVSANLILLRNRLLDILLKLVYTSKEKTSINFQACEEL
VKTLGFDWIMMFMEEHLHSTTVTAAMRILVVLLSNQSILIKFKEGLSGGGWLEQTDSVLT
NKIGTVLGFNVGRSAGGRSTVREINRDACHFPGFPVLQSFLPKHTNVPALYFLLMALFLQ
QPVSELPENLQVSVPVISGRYKQGGQFDLDSIWTFIFGVPASSGTVVSSIHNVCTEAAFL
LLGMLRSMLNSPWQSEEEGSWLREYPVTLMQFFRYLYHNVPDLASMWMSPDFLCALAATV
FPFNIRPYSEMVTDLDDEVGSPAEEFKAFAADTGMNRSQSEYCNVGTKTYLTNHPAKKFV
FDFMRVLIIDNLCLTPASKQTPLIDLLLEASPERSTRTQQKEFQTYILDSVMDHLLAADV
LLGEDASLPITSGGSYQVLVNNVFYFTQRVVDKLWQGMFNKESKLLIDFIIQLIAQSKRR
SQGLSLDAVYHCLNRTILYQFSRAHKTVPQQVALLDSLRVLTVNRNLILGPGNHDQEFIS
CLAHCLINLHAGSNVDGFGLEAEARMTTWHIMIPSDIEPDGGYSQDISEGRQLLIKAVNR
VWTELIHSKKQVLEELFKVTLPVNERGHVDIAIARPLIEEAGLKCWQNHLAHEKKCISRG
EALVPTTQSKLSRVSSGFGLSKLTGSRRNRKESGLNKHSLSTQEISQWMFTHIAVVRDLV
DTQYKEYQERQQNALKYVTEEWCQIECELLRERGLWGPPIGSHLDKWMLEMTEGPCRMRK
KMVRNDMFYNHYPYVPETEQETNVASEIPSKQPETPDDIIPQKKPARYRRAISYDSKEYY
MRLASGNPAIVQDAIVESSEGEATQQEPEHGEDTIAKVKGLVKPPLKRSRSAPDGGDEEN
QEQLQDQIAESSAIEEEEKTDNATLLRLLEEGEKIQHMYRCARVQGLDTSEGLLLFGKEH
FYVIDGFTMTATREIRDIETLPPNMHEPIIPRGARQGPSQLKRTCSIFAYEDIKEVHKRR
YLLQPIAVEVFSGDGRNYLLAFQKGIRNKVYQRFLAVVPSLTDSSESVSGQRPNTSVEQG
SGLLSTLVGEKSVTQRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEEV
DLNNPKTFRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLV
RMEPFTQIFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSN
NFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQG
PAAVEAVNVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRSR
LNGDSAGISVPPGTTSDKIFFPSSRQLRPSLTPIKSPRNIGLISKIVQEQEDCREALQNT
CQGDIPPSRSWSNLKSQALLLISFGL
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggtgaagaggatcatggggaggccgaggcaggaggagtgcagcccgcaggac
aatgccttgggactgatgcacctccgccgtctcttcactgagctgtgccatcctccccgg
cacatgactcagaaggaacaagaagagaaattatacatgatgctgccagtgtttaacagg
gtttttggaaatgctccgccaaatacaatgacagaaaagttttctgatcttctgcagttc
acaacacaggtctcacgactaatggtgacagaaattcgaaggagagcatcaaacaaatcc
acagaaaaacagtgtaccctgccgccctccagggatttcagagccacaacaccttcagag
gctgcaagtcgggccatagtccagttcctggagatcaatcagagtgaagaagccagtaga
ggctggatgcttctgacaactattaatttgttggcatcctctggtcagaaaactgtggac
tgcatgacaacgatgtcagtgccttccaccctggttaaatgtttatatctgttttttgac
cttccacatgtgcctgaggcagttggaggtgcacagaatgagctacctctagcagaacgt
cgaggactactccagaaagtttttgtacagatcttagtgaaactctgcagctttgtttct
ccagcggaggagctggctcagaaagatgatctccagcttttattcagtgcaataacctct
tggtgccctccctataatttgccttggaggaagagtgctggagaagtccttatgaccata
tcccgccatggtcttagtgtcaatgtagtcaagtatattcatgaaaaagaatgtttatct
acttgtgttcagaatatgcagcaatcagatgacctatctcccctagaaattgtcgaaatg
tttgctgggctttcttgttttctcaaagactccagtgatgtttctcaaacacttttggat
gattttcggatatggcaaggatataattttctttgtgatctcttgcttagattggaacaa
gcaaaagaggcagaatccaaagatgccttgaaagatctggttaatctgataacttcccta
acaacatatggtgttagtgaactcaaaccagctggtattaccacaggagcacccttttta
ttgcctggatttgcagtacctcagcctgcaggcaaaggtcacagtgtgagaaacatccag
gcctttgcagttcttcagaatgcatttttaaaagcaaaaaccaacttccttgcccaaatc
atccttgatgccatcacaaatatttacatggctgacagtgccaattatttcatcttagag
tcacagcacacactgtcacagtttgcagagaagatttctaaactcccagaagtacaaaac
aaatactttgagatgctggagtttgtcgtttttagcttaaattatattccgtgtaaagaa
cttattagtgttagtatcctcttaaaatctagttcttcttaccattgtagcattattgca
atgaaaactctacttaagtttacaagacatgactacatatttaaagatgtgttcagggag
gtgggccttctggaggtcatggtaaaccttttgcataaatatgctgccctcttgaaggat
ccaacccaggcaccagatgaacaaggggactcaagaaataatagttccgttgaagaccaa
aaacacctggctctgttagttatggagactttgacagtgcttcttcaaggctcaaacaca
aatgcaggaattttccgagagtttgggggagcaagatgtgcgcacaatatagtaaagtat
cctcaatgccggcagcatgccttgatgactatccagcagctggtgctctctccaaatggg
gatgatgacatggggactctcctggggttaatgcattcagccccacccacagaactgcag
ttaaagactgacattttaagggccctcctttcagtccttcgagaaagccatcgttcgaga
acagtttttaggaaagttggaggatttgtgtacattacatccttgcttgttgctatggaa
agatctttgagctctcccccaaagaatggctgggagaaagtgaaccagaatcaagtgttt
gaacttctccacacggtgttctgcacattgactgcggcaatgcgctatgagccagccaac
tctcatttcttcaaaacagagattcagtatgagaagttggcagatgctgttcgatttctt
ggctgcttctcagacctaagaaaaataagcgccatgaatgtcttcccctcaaacacacag
ccatttcaaagactgctagaggaagacgcggtctcagtggactcagtgtcacccacttta
cggcactgcagtaaactctttatttacctctacaaagtagccacagattcttttgacagt
cgtgcagaacagattcctccttgcctgacaagtgagtcttctctcccctctccttggggg
acaccagctttgtcaaggaaaaggcatgcatatcattctgtttcaactccccctgtctgc
cctgcaaaaaatgttgctgacctgaaactgcatgtggcggcatcctctctccagagctcc
gacgctgtcatcatccatcctggagccatgcttgccatgctggacctcctggcctccgtt
gggtcagtgacacagccagaacatgctttggaccttcaacttgctgtggcaaatatttta
caatccctggtgcacacagaaagaaaccagcaagtcatgtgtgaagctggtcttcatgca
cgactgctgcagaggtgcagtgctgccctggctgacgaggaccattctctgcacccaccc
ctgcagcgcatgtttgaacgcttagcctcccaggccctggagcccatggtgctgagagag
tttttacgtttggcaagtcctttgaattgtggtgcctgggacaaaaaactgctaaagcaa
tatagggtccataaaccaagttcattgtgttacgagccagagatgagaaacagtatgatc
acttccatggaaggtctgggttctgacagtgttttcagcttacctgaagataaccattac
cggataagcaagagcctggtaaaatctgcagaaggtagcactgtacccttgaccagggtg
aagtgtctggtctccatgacaaccccacatgacatcagacttcatgggtcatctgttacg
ccagcatttgttgaatttgacacatcccttgaagggtttggctgcctgtttctgcctagt
ttggctcctcataatgcccctacaaataatgctgtcacaacatgtcttaatgatggggct
gtggtcagcggcattggttctggtgaaaggttcttccctcctccgtctggcttaagctac
tctagctggttttgtattgaacatttcagttctcctcctaataaccaccccgtcagactc
cttactattgttcgccgagcaaattcttctgaacagcattacgtgtgccttgccatagtt
ctgtcagcaaaagaccgatctctgattgtttccactaaagaggaactactccaaaattat
gttgatgattttagtgaagaatcctctttttatgagattttgccgtgctgtgcccgcttt
cgatgtggagagcttatagttgagggacagtggcatcatttggttttggtgatgagcaaa
ggcatgctgaaaaacagtactgcagccctctatatagatggacagcttgttaacactgta
aagcttcattatgttcacagtactcctgggggttcaggctctgtgaatcccccagtggtg
agcacagtctacgcctacatcggcactccacctgcacaacgccagatcgcttcattggtt
tggcgcctgggacctacacattttctagaagaagttttacctccttcaaatattactacc
atttatgaactcggaccaaattatgttggaagctttcaggctgtgtgcatgccatgtaaa
gatgcaaaatccgaaggtgttgtcccttctcctgtgtcattagttccagaagaaaaggtg
tcctttggtctgtatgcactctctgtgtcctccttgacagtggcgagaatccggaaagta
tataacaagttggatagcaaagccattgccaaacagttaggcatttcctcccatgagaat
gccactcctgtgaagttgatacacaattcagcaggacatcttaatggacctgcacggacc
attggagctactctgattggatatttgggagtaagaacatttgtccctaagcctgttgcc
actactttgcagtacattggtggagctgcagccatcctgggcctagtggccatggcctct
gatgtggaagggttatatgcagcagtcaaggccctggtttgtgtggtcaagagtaaccca
ctggccagcaaagaaatggaaagaatcaagggctaccagttgctggcaatgctgcttaag
aagaaacgctcccttcttaacagccacatcctccatctaactttctccttggtgggaact
gttgatagtggacatgaaacctccattattcccaattcaactgctttccaggatctgctt
tgtgattttgaagtgtggctccatgcaccatatgaacttcatctttccttatttgaacac
tttattgaactgctcactgagtccagtgaagcttctaagaatgccaaattaatgagggaa
ttccagttaatcccaaagctgctactgacccttcgagatatgtctttatcccaacctacc
attgctgctattagtaatgtgctaagcttcttgctacaaggttttcccaacagcaatgat
ctgctcaggtttggccagtttatttcttctactttgccaacctttgcagtttgtgagaaa
tttgtagttatggaaataaataatgaagagaaacttgacatgggaactgaggaagagttt
ggaggtcttgtatctgctaatctcatacttttgaggaacagacttctagatatcttgctg
aaactagtttatacatctaaagaaaaaacaagcattaactttcaagcttgtgaagaactg
gtcaagacactgggttttgactggattatgatgtttatggaagaacacttgcattccact
acagtgacggcagccatgagaattcttgttgtcctgctgagtaatcagtctattctcatc
aagtttaaagaaggactcagtggtggaggatggcttgaacagacagattctgtcttaacc
aataagattggaactgtattaggattcaatgtgggcaggagtgccggtgggagatcaaca
gtcagggagattaaccgggatgcttgtcattttcctggttttccagttcttcagtccttc
cttcctaaacatactaatgtccctgccctctattttctcctcatggcattgtttctgcag
cagccagttagtgagctgcctgagaacctgcaggtcagtgtgcctgtcatcagcggccga
tataagcagggtggccagtttgatttggattctatctggacgtttatttttggagttcct
gcctccagtggaactgtggtttcttctatccacaatgtatgtacagaagctgctttttta
ttgttgggaatgctccgcagcatgctgaattcaccttggcaatcagaagaagaggggtcc
tggctccgggaatatccagtgaccctgatgcagttctttagatatttatatcacaacgtt
ccagaccttgcctccatgtggatgagccccgatttcctgtgtgccttagcagcaactgtc
ttccccttcaatattcgcccttactcagagatggtgacggatcttgatgatgaagttgga
tctccagctgaagaatttaaagcctttgctgcagacacagggatgaacaggagccaatca
gaatactgcaatgtgggcaccaagacatatctgaccaatcacccagctaaaaagtttgtt
tttgacttcatgcgggtcttaataatagacaacctctgccttacccctgccagcaagcag
actccactaattgatcttttgttggaggcttcccctgaaagatctacaagaactcagcaa
aaagaatttcagacttacattttggatagtgtaatggatcatttgcttgcagctgatgtg
ttattgggggaagatgcatctctgcctattaccagtggaggaagctaccaggtattggtg
aacaatgtgttttatttcacacaacgtgtggtggacaagctttggcaaggcatgttcaac
aaagaatctaaacttcttatagattttataattcaactaattgcacagtcaaagagaaga
tcacagggattgtcattggatgcagtttatcactgcctcaatagaaccatcttataccaa
ttctcacgggcacacaaaactgttcctcagcaagtcgctctccttgattcgctcagggtc
cttacagtgaacaggaacttgatcctgggacctggaaaccatgaccaagaattcattagc
tgtctggctcactgcttgattaatctacatgctggaagcaatgtggatggatttggactg
gaagcagaagcccgcatgactacatggcacattatgatcccctctgacattgaaccagat
ggtggatacagccaagatattagtgaagggcgtcagcttctcataaaagctgttaataga
gtgtggactgagttgatacatagtaagaaacaagtcttggaggagcttttcaaagtaact
ctgcctgtgaatgaaaggggtcatgtggacatcgcaatagcaagaccactcatagaagaa
gctggtttgaaatgctggcagaatcatttggcccatgagaagaaatgtataagtcgagga
gaagcgttagtgcctaccacacagtccaaattgtcccgtgtcagcagtggctttggtctt
tccaagttaacaggatcaagaaggaatcgaaaggaaagtggtcttaataaacacagtctt
tccacccaggagatttctcagtggatgtttacacacatcgctgttgttcgtgacttagta
gacacacaatataaggaatatcaagagcgtcagcagaatgccctgaagtacgtgactgag
gagtggtgccagattgagtgtgagctgttgcgggagcgagggttatggggtccccccatt
ggttcccatctagacaaatggatgttggagatgacagaaggaccctgcagaatgaggaaa
aaaatggtgcgaaatgacatgttttataaccattacccctatgtgccagaaacagagcaa
gagacaaatgtggcgtctgagattccaagtaaacaacctgagacacccgatgatatcatt
cctcaaaagaaacctgctcgatacagaagagccataagttacgatagtaaagaatactac
atgcgattagcgtctggcaatccagccattgtccaggatgccatagtagagagttcagaa
ggcgaagccacacagcaagagccagagcatggtgaagacacaattgctaaagtcaaaggt
ctggtcaagcctcctctaaaacgctctcggtctgcacctgatggaggagatgaggagaac
caggagcagctacaagaccagattgctgagagcagcgctatagaggaggaggagaaaaca
gacaatgccaccttactgcgcctattagaggaaggagaaaagatccagcatatgtaccgt
tgtgctcgagtccagggcctagacaccagtgaggggctacttctttttggtaaagaacac
ttttatgtgattgatggatttaccatgactgcaacaagggaaataagagatattgagacc
ttacctccaaatatgcatgaaccaattatccctagaggagccaggcaagggcccagtcaa
ctcaagagaacatgcagcatttttgcatatgaggatatcaaggaagtgcataaacggcgg
tatctcctgcagcctattgcagttgaagttttttctggagatggacggaattacctcctt
gcttttcagaaaggaattcggaacaaagtctaccaaaggtttttggcagtagtgccatct
ctcactgacagttcagaatctgtgtctgggcagcggccgaacactagtgtggagcaggga
tctgggctgcttagcactttggttggagaaaagtctgtgacgcagagatgggagagaggt
gaaatcagcaacttccagtatttgatgcacttgaacactttggctggcagatcctacaat
gatctcatgcagtatcctgtctttccttggatcctcgcagattacgactcagaggaagta
gatcttaataatcccaagacatttagaaacctggctaagccaatgggagcacaaacagat
gaacggttagctcagtataagaaacgttataaagactgggaggatcctaatggagaaacc
ccagcataccactatggaacccactattcatctgcaatgatcgtagcctcctacctcgta
aggatggagcctttcacacagatattcttaaggctacagggtggccactttgacctggct
gatcggatgtttcacagtgttcgtgaggcctggtattcagcatcaaagcacaacatggca
gacgtaaaagaacttatcccagaatttttttacttaccagaattcctgttcaattccaac
aactttgatctaggctgtaaacaaaatggcaccaagcttggagatgttatccttccaccc
tgggccaaaggggacccacgagaattcattcgagtccaccgtgaggctttggagtgtgat
tatgtgagtgcccatctgcatgaatggattgatttaatctttggctacaaacagcagggt
cctgctgcagtagaagctgtaaatgtcttccatcaccttttttatgagggtcaagtggat
atctacaatataaatgatccactgaaggagacagccaccatcggcttcattaataacttt
ggtcagatccctaaacagttatttaaaaaacctcatccaccaaaacgagtgaggagtcga
cttaacggagacagtgcaggaatctcagtcccaccaggaaccacaagtgacaagatcttt
tttccatcatctagacaattgaggccttctctaacacccattaaaagccccaggaatata
ggtctgatttccaagattgtccaggaacaggaggactgtagggaagccctgcagaacacc
tgtcagggtgacatcccacccagcagatcttggagtaacctcaaaagccaagctttgctt
ctgatatcatttggtctttaa
DBGET
integrated database retrieval system
