Sciurus carolinensis (gray squirrel): 124994344
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Entry
124994344 CDS
T08117
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124994344
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124994344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124994344
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-rER
124994344
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GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6279
DUF4559
Phage_CP76
Motif
Other DBs
NCBI-GeneID:
124994344
NCBI-ProteinID:
XP_047422062
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All DBs
Position
10:complement(134934693..135049492)
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AA seq
335 aa
AA seq
DB search
MAVDITLLFRASVKTVKTRNKALGVAVGGGAEGSRDELFRRSPRPKGDFSSRAREVISHI
GKLRDFLLEHRKDYINAYSHIMSEYGRMTDAERDQIDQDAQIFMRTCSEAIQQLRTEALK
EIHSQQVKEHRTAVLDFIQDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRES
TSPEKVSQNPSKDSEEKLAPEEYPEKILTEAEPQLGTWGDGKGEDELSPEEIQMFEQENQ
RLIGEMNNLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE
DIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacatcaccctgcttttccgggcgagtgtcaagaccgtgaagacgcggaac
aaggcgctgggagtggcggtgggcggcggggcggagggcagccgcgacgagctgttccgt
cggagcccgcggcccaagggcgacttctccagccgcgcccgcgaagtgatttctcacatt
ggcaaactgagagattttcttctggaacacaggaaagattacattaatgcttacagtcat
atcatgtctgaatatgggaggatgacagatgcggaacgagaccagatagaccaggacgcc
cagatattcatgaggacctgttcagaagcaattcagcaactcaggacagaagccctcaag
gagatacattcccagcaagtgaaggagcacaggactgctgttctggatttcattcaagat
tacttaaaaagagtgtgtaaactttactcagaacaaagagccatccgagttaaacgagtg
gtggataagaagagattatctaaactggaaccagaaccaaataccaagacaagagaatca
acatctcctgagaaagtttcacagaatccttcaaaagactctgaagagaaacttgcccct
gaagagtatccagaaaagattctgactgaagcagaacctcagctgggaacctggggagat
ggcaaaggtgaagatgaattatccccagaagaaatacaaatgtttgaacaagaaaatcag
aggctcattggggaaatgaacaacttgtttgacgaagtaaggcaaatcgaagggagagtg
gttgaaatctccagactgcaagagatatttacggaaaaggttttgcaacaggaagccgag
attgacagcatccaccagttagttgtaggagcaacggaaaacatcaaggagggcaatgag
gacatacgagaggccattaagaacaacgctggtttccgcgtgtggatcctcttcttcctg
gtgatgtgctccttctccctgctcttcctggactggtacgacagctag
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integrated database retrieval system