KEGG   Sciurus carolinensis (gray squirrel): 124994368
Entry
124994368         CDS       T08117                                 
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    124994368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124994368
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124994368
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int BRD4_CDT
Other DBs
NCBI-GeneID: 124994368
NCBI-ProteinID: XP_047422113
LinkDB
Position
10:complement(69234965..69416728)
AA seq 1241 aa
MAFTERVKSSGSSLYNEDRNLLRIREKERRNQEAHQEKESFPEKIPLFGEPYKTAKGDEL
SSRIQNMLGDYEEVKEFLSTKSHPQCLDASENRLGKPRYSLFPDKGSSIPSNSFHTSVHH
QPMYTPASGPLPVGNISHNPKIAQPRMEPLPSLHAKNYGPPDNQHLTQDRLGQEGYNSSH
HKKGDRRADGDHCASMIDSTRARELSPLISSLPSPVPPLSPLHSNQQTLPRTQGSIKVHS
SSNNSKGYCPAKSPKDLAVKVIDNETPQDSLVAVVSHGVAPPQPPSQTFPPPSLPSKSVA
MQQKPTAYVRPMDGQDQAPSESPELKPLPEDYRQQSFERTDSKVPAEAKLTKLKMPSQTA
EQTYSNEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHISSATQNQKQY
DAPSKTHPNSQQGTSMLEDDLQLSDSEDSDGEQTPEKPPSSSAPPSAPQSLPEPVASAHS
SSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKVSQPV
VPAEGSGSTESPRRRQESKGGSDSTTGQEHSESKDPPPKSSSKAPRVPSDGSHPGKRSCQ
KSPAQQEPPPRQTIGTKQPKKPVKSSAQADSRASLQVESEPGLLPYGSKDLTSKDKPKVK
TKGRPRIGGSREPKPTAPVPSEKKKHKSSPAAPSKAPSGPEPTKDSVGDRSPEHFALVPL
TQSQGPPHSGGGGGRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPTPQSLVVKI
TLDLLTRIPQPPGRGSRPKKPEDKQLPTGKKQDSEKRNSDNSSKLAKKRKGETERDYDNK
KIRLEKEVKSQSSSTSSSHKESSKTKTPRPSSEPAKKEMLPPPPVSSSSSSSSSSSSSSS
SSSSQKPAKPAHKRSRREADMCGQDPPKSASSTKSNHKDPSVSKHRKVQGKGSGSSTEHR
GTSGDTANPFPVPSLPNGNSKPGKPQVKLDKQQADFHMKEAKKLKCKAESMTDKVGKAFK
YLEAILSFIECGIAMESESPASKSAYSVYSETVDLIKSTMSLKSFSDATAPIQEKIFAVL
CMRCQSLLNMAMFRCKKDIAIKYSRTLNEHFKSSSKVTQAPSPCIARSTGTPSPLSPMPS
PASSAGSQSSAGSMGSSGMTATISTPVTIQNMTSSYVTITSHVLTAFDLWEQAEILTRKN
KEFFAQLSTKVCTLALNSSLVDLVHYTRQGFQRLKQVTKTP
NT seq 3726 nt   +upstreamnt  +downstreamnt
atggcattcactgaaagagtcaaaagcagtggcagcagcttgtacaatgaagacagaaac
ctgcttcgaattagagagaaggaaagacgcaaccaggaagctcaccaagagaaggagtca
tttcctgaaaaaatccccctttttggagagccttacaagacagcaaaaggtgatgagctg
tccagtcggatacagaacatgttgggggattatgaagaagtgaaggagttccttagtacc
aagtcccaccctcagtgcttggatgcttctgaaaataggttgggaaaaccaagatattct
ttatttcctgacaaggggagcagcattccatccaactccttccacaccagtgtccaccac
cagcccatgtatactcccgcctccggaccacttcctgttggtaacattagccacaatcca
aagatagcacagccaagaatggaaccattaccaagtctccatgccaaaaactatggccca
cctgataaccagcacctgacccaggaccgccttggacaggaggggtacaactctagtcac
cacaaaaaaggtgaccgcagagctgatggagaccactgtgcttcgatgatagactcaact
cgagcaagggagctctctcccttaatctcctctttgccttccccagtgccccctttgtca
cctttacattccaaccagcaaactcttcccaggacacaaggaagcatcaaggttcacagt
agtagcaataacagtaaaggctactgcccagccaagtctcccaaggacctggcggtgaag
gtcattgataatgagacccctcaagacagtttggtggcagttgtcagccatggggtcgcc
ccaccccagccaccttctcagacatttccacccccctcccttccctcaaaaagtgttgca
atgcagcaaaaacccacggcttatgtgaggcccatggatggtcaagatcaggctccgagt
gagtctcctgagctgaaaccactgccggaggactaccggcaacagagctttgaaagaaca
gactcaaaagtgcctgccgaagccaagctcaccaaactgaagatgccttcacagacagct
gagcagacctactccaatgaagtccattgtgttgaagaaattctaaaggaaatgacccac
tcatggcctcctcctttgacagcaatacatacgcctagtacagctgagccatccaaattt
cctttccctacaaaggattctcagcatatcagttctgcaacccaaaaccaaaaacaatat
gatgcaccttcaaaaactcaccctaattctcagcaaggaacatccatgcttgaagatgac
cttcagctcagtgacagtgaggacagtgatggtgaacaaaccccagagaagcctccttcc
tcatctgcacctccaagtgctccacagtcgcttccagaaccagtggcatcagcacattcc
agtagtgcagagtccgagagcaccagtgactcagacagctcctcagactcggagagtgag
agcagttcaagtgacagcgaggagaatgagcccctagaaaccccggctccagagcctgaa
cctccaacaacaaacaaatggcagttggacaactggctgaccaaagtcagccagcctgtg
gtgcctgccgagggctcagggagcacagagtcccctcgccggcgccaggaaagtaagggt
ggcagcgatagcaccacgggtcaggaacattctgagtccaaagatcctccccccaagagc
tccagcaaagctccccgggtcccctctgacggctcccaccctggaaagagaagctgtcag
aagtcccctgcacaacaggaacccccacctaggcaaactattggaaccaaacaacccaaa
aagcctgtcaagtcctctgcccaggcggattctcgggccagcttgcaggtggaaagtgaa
ccaggacttcttccctatggctcaaaagacctgacctccaaagataagcccaaggtgaag
acgaaaggcaggccgcgcattggaggcagcagagagcccaagcccacagcgcccgtcccc
agtgagaagaagaagcacaagagctcccccgcagccccctccaaggcgccctcaggccca
gaacccacaaaggacagtgtgggagacaggagccctgagcactttgctcttgtccccctg
actcagagccagggcccgccccatagtggcggtggcggtggcaggactagtggctgccgg
caagcagtggtggtccaggaggacagccgcaaagacagactcccgttgcctttgagagac
accaagttgctctcaccgctcagggacactcccaccccacagagcttggtggtgaagata
accctagaccttctcactcggattccccagccaccagggagggggagccgtccaaagaaa
ccagaagataaacagctgcctacagggaagaagcaggactctgagaagagaaactcagac
aactccagcaagttggccaaaaagagaaagggtgaaacagaaagagactatgataacaag
aaaatcagactggagaaagaagtcaaatcacagtcctcttcaacctcatcctcccacaaa
gaatcttctaaaacaaagacacccaggccctcctcagagcccgcaaaaaaagaaatgctt
ccccctccacctgtgtcgtcctcatcctcgtcctcatcctcatcctcgtcctcatcctca
tcctcatcctcccagaagccagccaagcctgcacacaagaggtcaaggcgggaagcagac
atgtgtggccaggaccctcccaaaagtgccagtagcaccaagagcaaccataaagatcct
tccgtttcaaagcacagaaaagtacaggggaaaggctctggaagctccactgaacacaga
ggaacttctggagatactgcaaatccttttccagtgccttctttgccaaatggtaactct
aaaccagggaagcctcaagtgaagcttgacaaacagcaagctgattttcacatgaaggag
gccaaaaagttgaagtgcaaagcagagtcaatgacggacaaggttggaaaggccttcaag
tacttggaagccatcctgtcctttatcgagtgtgggattgccatggagtctgagagtccg
gcctcaaagtctgcttattcagtgtactcagaaactgtagatctcattaaatccacaatg
tcattaaaatccttctcagatgccacagcaccaatacaagaaaaaatatttgctgtttta
tgtatgcgttgccagtcccttttgaacatggcaatgtttcgctgtaaaaaagacatagca
ataaagtattctcgtactcttaacgaacacttcaagagttcttccaaagtgacccaggcc
ccttctccgtgcattgcaagaagcacaggcacaccatcccctctgtccccaatgccttct
cctgccagctctgcagggtcccagtcaagtgctggcagtatggggagcagtggaatgact
gccaccatcagcaccccagtcaccatccagaacatgacctcttcctatgtcaccatcacg
tcccacgtccttaccgcctttgatctttgggaacaggctgaaatccttacaaggaagaat
aaagaattctttgctcagctcagcacaaaagtatgcacattggccctcaacagcagtctg
gtggacctggtgcactatacaagacagggttttcagcggctaaaacaagtaaccaaaaca
ccttaa

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