Sciurus carolinensis (gray squirrel): 124994495
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Entry
124994495 CDS
T08117
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124994495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124994495
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124994495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
hEGF
LRRCT
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
124994495
NCBI-ProteinID:
XP_047422454
LinkDB
All DBs
Position
10:complement(125365631..125710579)
Genome browser
AA seq
1529 aa
AA seq
DB search
MRGIGWQTLSLSLGLVLAVLNEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDSFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLESVRHK
MFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDSS
CSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPRGFKCDCTPGYIGEHCDIDFDDC
QDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRI
NEPICQCLPGYQGEKCEKLVSVNFINKESYLQIPSAKVRPQTNITLQIATDEDSGILLYK
GDRDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGS
PKIITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDF
RKVPMQTGILPGCEPCHKKVCAHGRCQPSGPSGFTCECEEGWMGPLCDQRTNDPCLGNKC
VHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQTIKCKHGKCRLSGLGQPYCECSS
GYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCAGAQCCGPLRSKRR
KYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcattggctggcagacgctgtccctatcgctggggttagtgttggcggtcctg
aacgaggtggcgccgcaggcgtgcccggcgcagtgctcctgctccggcagcactgtggac
tgtcacgggctggcactgcgcagcgtgcccaggaatataccccgcaacactgagagactg
gatttgaatggaaataacatcacacggattacgaagacagattttgctggccttagacac
ctaagagttcttcagcttatggagaacaagattaccaccattgaaaggggagcattccag
gatcttaaagaactagagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacttcgaagctatacaggcttgatctgagtgaaaaccaaatccag
gcaattccaaggaaggccttccgtggggcagttgatattaaaaatttgcaactggattac
aaccaaatcagctgtattgaggatggggcattcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagtttcaaccatatgcctaaa
cttaggacttttcgactccattcaaacaacctgtactgtgactgccacctggcctggctc
tccgactggcttcgacaaaggcctcgggtgggcctgtacactcagtgcatgggcccttct
cacctgaggggccataatgttgcagaggttcaaaaacgagaatttgtctgcagcggtcac
cagtcatttatggctccctcctgtagcgtgttgcactgccctgcggcttgcacctgtagc
aacaacatcgtagactgtcgcggtaaaggtctcactgagatccccacaaatctgccagag
actatcacagaaatacgtttggaacagaactcaatcaaggtcatccctcctggagcattc
tcaccatataaaaagcttagaagaattgacctgagcaataatcagatctctgaacttgca
cctgattctttccaaggactgcgttctctgaattcacttgttctctatggaaataaaatc
acagaactcccaaaaagtttatttgaaggactcttttccttacagctactattattgaat
gccaacaagataaactgccttcgggtagatgcttttcaggatctccacaacttgaacctt
ctctccttgtatgacaacaagcttcagaccattgccaaggggaccttctcacctctccgg
gccattcaaactatgcatttggcccagaacccctttatttgtgactgccatctcaagtgg
ctggcggattatctccataccaacccgattgagaccagtggtgcccgctgtaccagcccc
cgccgcctggcaaacaaaaggattggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggtacggaagattatcgatcaaaattaagtggcgactgc
tttgcagacttggcttgccctgaaaagtgtcgctgtgaagggaccacagtagattgctcc
aatcaaaaactcaacaaaatcccggatcatattccccagtacactgcagagctacgtctc
aataataatgaattcacagtattggaagccacaggaatctttaagaaacttcctcagtta
cgtaaaatcaactttagcaacaataagatcacagatatcgaggagggagcatttgaagga
gcgtctggggtaaatgaaatacttctcacaagtaaccgtttggaaagtgttcggcataag
atgttcaagggattggaaagtctcaaaactctgatgttgagaagtaatcgaataagctgt
gtggggaacgacagtttcattggactcagttccgtgcgtttgctttctttatatgacaat
caaatcaccacgattgcaccaggggcattcgatactctccattctttatctactctaaat
ctcttggccaatccttttaactgtaactgctacctggcttggttgggagagtggctcagg
aagaaaagaattgtaactggaaatcctcggtgtcagaaaccatacttcctcaaagaaatc
cccatccaggacgtggccattcaggacttcacctgtgatgacggaaatgatgacagcagt
tgctccccgctctctcgctgtcccacggaatgtacttgcttggatacagtggtccgatgt
agcaacaagggcttgaaggtcttgcccaaaggtattccaagagatgtcacagagctatat
ctggatgggaaccagtttacactggttcccaaagaactctctaactacaaacatttaaca
cttatagacttaagtaacaacagaataagcaccctttccaatcagagcttcagcaacatg
actcagctcctcaccttaattctcagttacaatcgtctgagatgtattcctccgagaacc
ttcgatggattgaagtctcttcgattactttctctacatggaaatgacatttctgttgtg
cctgaaggtgctttcaatgatctttcagctttatcacacttagcgattggagccaaccct
ctttactgtgattgtaacatgcagtggctctccgactgggtgaagtcggagtataaggaa
cctggaattgctcgctgtgctggtcctggagaaatggcagataaactgttactcacaact
ccctccaaaaaattcacgtgtcaaggtcctgtggatgtcaacattctagctaaatgtaat
ccctgcttatcaaatccatgtaaaaatgatggcacctgtaacaatgatccagttgacttt
tatcgatgcacctgcccatatggtttcaaggggcaggactgtgatgtcccaattcacgca
tgcatcagtaacccatgtaaacatggaggaacttgccacttaaaagaaggagaaaaagat
ggattctggtgtatctgtgctgatggttttgaaggagaaaattgtgaagtcaatgttgat
gattgtgaagacaatgactgtgaaaataattctacgtgtgttgatggaatcaataactac
acatgcctttgcccacctgagtacacaggcgagttgtgtgaggagaagctggacttctgt
gcccaggacctgaacccgtgccagcatgactccaagtgcatcctgacgccaagggggttc
aagtgtgattgcacaccaggatacattggtgaacactgtgacattgactttgatgactgc
caagataacaagtgtaaaaatggtgcccactgcacagatgcagtgaatggctatacatgc
atctgcccggaaggttacagtggcttgttctgtgagttttctccccccatggtcctccct
cgtaccagcccctgtgataattttgattgtcagaatggagcccagtgcatcatcaggata
aatgagccaatatgtcagtgtttgcctggataccaaggagagaagtgtgaaaaactggtc
agtgtgaattttataaacaaagaatcctatcttcagattccttcagccaaggtccgacct
cagactaacatcacacttcagatcgccacagatgaggacagcggcatcctcctgtacaag
ggcgacagagaccatatcgcagtggagctctaccgtgggcgagttcgcgccagctacgac
acgggctctcacccggcttctgccatttacagtgtggagactatcaatgatggaaacttt
cacattgtggagctgcttgccctggatcagagtctttccctctctgtggatggagggagt
cccaaaatcatcaccaacttgtcaaaacagtccactctgaattttgactccccactctac
gtaggaggcatgccagggaagaacaacgtggcatctctgcgccaagcccctgggcagaac
ggcaccagtttccatggctgcatccggaacctgtacatcaacagtgagctgcaggacttc
cggaaggtgcccatgcagacaggcattctgcccggctgtgagccatgccacaagaaggtg
tgtgcccatggcaggtgccagcccagcggcccatcaggcttcacctgcgagtgtgaggaa
ggatggatgggccccctctgtgaccagcggaccaatgacccttgtcttggaaataaatgc
gtccatggcacctgcttgcccatcaatgccttctcctacagctgtaagtgcctggagggc
cacggaggtgtcctctgcgatgaggaagaggatctcttcaacccctgccagacgatcaag
tgcaagcacggcaagtgcagactctcggggctcgggcagccctactgtgagtgcagcagt
ggatacacgggggacagctgcgatcgagaaatctcttgtcgaggggaacgaataagagat
tattaccaaaagcagcagggctacgcagcctgccaaaccaccaagaaggtctcacgcctg
gagtgtaaaggcgggtgtgcgggggcacagtgctgcgggcctctgaggagcaagcggcgg
aaatactctttcgaatgcactgacgggtcctcctttgtggacgaggttgagaaggtggtg
aagtgcggttgcacgaggtgcgcgtcctaa
DBGET
integrated database retrieval system
