Sciurus carolinensis (gray squirrel): 124994508
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Entry
124994508 CDS
T08117
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124994508
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124994508
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
124994508
NCBI-ProteinID:
XP_047422492
LinkDB
All DBs
Position
10:79639133..79672170
Genome browser
AA seq
687 aa
AA seq
DB search
MSSRNNNKLPNNLPQLQNLIKRDPPAYIEEFLQQYNHYKSNVEIFKLQPNKPSKELAELV
MFMAQIGHCYPEHLSNFPQELKDLLSYNHNVLDPDLRMTFCKALILLRNKNLINPSSLLE
LFFELLRCHDKLLRKTLYTHIVTDIKNINAKHKNNKVNIVLQNFMYTMLRDSNATAAKIS
LDVMIELYRRNIWNDAKTVNVITTACFSKVTKILVAALTFFLGKDEDEKQDSDSESEDEG
PTARDLLVQYATGKKSSKNKKRLEKAMKVLKKQKKKKKPEVFNFSAIHLIHDPQDFAEKL
LKQLESSKERFEVKMMLMNLISRLVGIHELFLFNFYPFVQRFLQPHQREVTKILLFAAQA
SHHLVPPEIIQSLLMTVANNFVTDKNSGEVMTVGINAIKEITARCPLAMTEELLQDLAQY
KTHKNKNVMMSARTLIQLFRTLNPQMLQKKFRGKPTEASVEARVPEYGELDAKDYIPGAE
VLEIEKEEKIENDEDGWESTSLSEGEDADGEWVDVHHSSDEEQQEISKKLNSMPMEERKA
KAAAISTSRVLTQEDFQKIRMAQMRKELDAAPGKAQKRKYIEIDSDEESRGELLSLRDIE
RLHKKPKSDKETRLATAMAGKTDRKEFVRKKTKINPFSSSTNKEKKKQKNFMMMRYSQNV
RSKNKRSFREKQLALRDALLKKRKRMK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagaaacaacaacaagctgcccaacaacctgccccagttgcagaatctgatc
aagcgggacccgccggcctacatcgaggagtttctccagcagtataatcactacaaatcc
aatgtggagattttcaagttacaaccaaataaacccagcaaagaactggcagagctggtg
atgtttatggcacagattggtcactgctacccagaacatctaagtaacttccctcaagaa
ctgaaagatcttctctcctacaatcataatgtcttggatccagatcttcgaatgacattt
tgcaaagctttgatcttgctgagaaataagaatctcatcaatccatcaagtttactagag
ctcttctttgaacttctgcgttgccatgataagcttctgcgaaagactttatacacacat
attgtaactgatatcaagaatataaatgcaaaacacaagaacaataaagtgaatatagtt
ttgcagaattttatgtataccatgttaagagatagcaatgcaactgcagccaagatatct
ttggacgtgatgatagaactctacagaaggaacatttggaatgatgccaaaactgttaat
gttatcacaactgcatgtttctctaaggtcaccaagatactagttgctgctttgacattc
ttccttgggaaagatgaagatgaaaaacaggacagtgactcagaatctgaggatgaaggc
cccacagcaagagacctgctagtgcaatatgccacagggaagaagagctccaaaaacaag
aagaggttggaaaaggcaatgaaagtactcaagaaacaaaagaagaaaaaaaagccagag
gtgtttaacttttcagccattcacttaattcatgatccccaagattttgcagaaaaacta
ctaaagcagctagagagctctaaggaaaggtttgaagtgaagatgatgctcatgaatctc
atctccagattggtgggaattcacgagctttttctcttcaacttttatcccttcgtgcaa
aggtttctgcagccccaccaaagagaagtaacaaagatccttctgtttgctgcccaggcc
tctcatcacctagtacctccagagatcattcaatcattgctcatgaccgtggccaacaat
tttgttactgacaagaactctggggaagtcatgacagtaggaatcaatgctatcaaagag
ataacagctcgatgtcctcttgccatgactgaagaactcctccaagacctggctcaatat
aagacacacaaaaataagaatgtaatgatgtctgctagaactctgattcagctcttccga
acactgaaccctcagatgttgcagaagaaattccggggtaaacctactgaagcctctgtt
gaagcaagggtaccagaatatggcgaattggatgctaaagattacattccaggagcagag
gttctagaaattgagaaagaagagaaaattgaaaatgatgaagatggatgggaaagtacc
agtcttagtgagggggaggatgctgatggtgaatgggttgatgtgcaccactcttctgat
gaagaacagcaagaaatttccaagaagctgaacagcatgcccatggaggagcggaaagcc
aaagctgcagccatcagcactagtcgagttttaactcaggaagacttccagaaaatccgc
atggcccaaatgaggaaagaacttgatgctgcccctgggaaagcccaaaaaagaaaatac
attgaaatagacagtgatgaggagtccaggggtgaattactttctcttcgggacattgaa
cgcctgcataaaaagccaaagtctgacaaggagacaagactagcaactgctatggctgga
aagacagatcgaaaggaatttgtgaggaagaaaaccaaaattaatccattttctagttcc
acaaataaagagaagaaaaaacagaagaactttatgatgatgcggtatagccagaatgtc
cggtcaaaaaacaagcgttccttccgagaaaagcagctggcgctacgagatgcacttttg
aaaaagaggaaaaggatgaagtaa
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