KEGG   Sciurus carolinensis (gray squirrel): 124994512
Entry
124994512         CDS       T08117                                 
Name
(RefSeq) nephronectin-like
  KO
K06824  nephronectin
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04512  ECM-receptor interaction
ncar04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124994512
   04518 Integrin signaling
    124994512
SSDB
Motif
Pfam: EGF_CA cEGF EGF_3 FXa_inhibition EGF EGF_MSP1_1 EGF_PEAR1L JAG1-like_EGF2 EGF_2 EGF_DL_JAG
Other DBs
NCBI-GeneID: 124994512
NCBI-ProteinID: XP_047422497
LinkDB
Position
10:complement(50222502..50293156)
AA seq 525 aa
MNFPLALELLSSLYLQTAAEFDGRWPRQIVSSIGLCRYGGRIDCCWGWARQSWGQCQPFY
VLRQRIARIRCQLKAVCQPQCKHGECIGPNKCKCHPGYAGKTCNQDEHFYPTPLDQGSEQ
PLFQPLDHEATSLPARDLNECGLKPRPCKHRCMNTFGSYKCYCLNGYMLMPDGSCSSALT
CSMANCQYGCDVVKGQVRCQCPSPGLQLAPDGRTCVDVDECATGRVSCPRFRQCVNTFGS
YICKCHKGFDLMYIGGKYQCHDIDECSLGQHQCSGFARCYNIHGSYKCKCKDGYHGDGLS
CVYIPKVMIEPSGPIHVPKGNGTILKGDGGDNWIPDVRSTRWPLKTPYIPPAITNRPTSK
PTTRPTPKPTPQPTPPPPPPLATEFRTPPPPPTPERPSTRLTTAEPATSTSARGVTVDNR
IQTDPQKPRGDVFIPRQPFNDLFEIFEIERGVSADDEAKDDPGVLVHSCNFDHGLCGWIR
EKDSDLHWEPIKDPAGITKMIKGLDKKLYDEKLKELGYSAWRKED
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaatttccccctggcgctggagctcctgtcctcgctctacctgcagacggccgccgag
ttcgacgggaggtggcccaggcaaatagtgtcatctattggcctatgtcgttatggtggg
agaattgactgctgctggggctgggctcgccagtcctggggacagtgtcaacctttctac
gtcttaaggcagagaatagccagaataaggtgccagctcaaagctgtgtgccagccacag
tgcaaacatggtgagtgtattgggcctaacaagtgcaagtgtcaccctggatatgccgga
aaaacctgcaaccaagatgagcacttctacccaactcctcttgaccaaggcagtgaacag
cctcttttccaacccttggatcatgaagccacaagtttacctgcaagggatctaaatgag
tgtggcctgaagcctcggccctgtaagcacaggtgcatgaacactttcggcagctacaag
tgctactgtctcaatggatatatgcttatgccggatgggtcctgctcaagtgccctaaca
tgctctatggcaaactgtcagtatggctgtgatgttgttaaagggcaagtccggtgccag
tgcccctccccaggtctgcaactggctcctgatgggaggacctgtgtggatgtcgatgaa
tgtgctactggaagagtctcgtgccctagatttagacagtgtgtcaacacttttgggagt
tacatctgcaagtgtcataaaggcttcgacctcatgtacattggaggcaaataccaatgt
cacgatatagatgaatgctcccttggtcagcatcagtgcagtggctttgctcgatgttac
aacatacacgggtcctataagtgtaaatgtaaagatggataccatggtgatggactcagt
tgtgtctatatccccaaagtcatgattgagccttcaggaccaattcatgtaccaaaagga
aatggtaccattttaaagggtgatggaggagataattggattcctgatgtcagaagtaca
aggtggcctctgaagacaccatatattcctcctgccattaccaacaggcctacttctaag
ccaacaacaagacctacaccaaagccaacaccacagcccactcctccaccaccaccaccc
ctggcaacagagttcagaacacctccacctccaccaaccccagaaaggccatccaccaga
ctgacaactgcagaaccagctacgagtacatctgcaagaggggttacagttgacaacagg
atacagacagatcctcagaaacccagaggagatgtattcattccacggcagcctttcaat
gacttgtttgaaatatttgaaatagaaagaggagtcagtgcagatgatgaagcaaaggat
gatccaggtgttctggtacacagttgtaattttgaccacggactttgtggatggatcagg
gaaaaagacagtgacttacactgggaaccaatcaaggacccagcaggaatcacaaagatg
attaaagggttggacaaaaagctctatgatgaaaaattaaaggaactgggatattcagcc
tggagaaaagaagactga

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