Sciurus carolinensis (gray squirrel): 124994512
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Entry
124994512 CDS
T08117
Name
(RefSeq) nephronectin-like
KO
K06824
nephronectin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04512
ECM-receptor interaction
ncar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124994512
04518 Integrin signaling
124994512
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Motif
Pfam:
EGF_CA
cEGF
EGF_3
FXa_inhibition
EGF
EGF_MSP1_1
EGF_PEAR1L
JAG1-like_EGF2
EGF_2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
124994512
NCBI-ProteinID:
XP_047422497
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Position
10:complement(50222502..50293156)
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AA seq
525 aa
AA seq
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MNFPLALELLSSLYLQTAAEFDGRWPRQIVSSIGLCRYGGRIDCCWGWARQSWGQCQPFY
VLRQRIARIRCQLKAVCQPQCKHGECIGPNKCKCHPGYAGKTCNQDEHFYPTPLDQGSEQ
PLFQPLDHEATSLPARDLNECGLKPRPCKHRCMNTFGSYKCYCLNGYMLMPDGSCSSALT
CSMANCQYGCDVVKGQVRCQCPSPGLQLAPDGRTCVDVDECATGRVSCPRFRQCVNTFGS
YICKCHKGFDLMYIGGKYQCHDIDECSLGQHQCSGFARCYNIHGSYKCKCKDGYHGDGLS
CVYIPKVMIEPSGPIHVPKGNGTILKGDGGDNWIPDVRSTRWPLKTPYIPPAITNRPTSK
PTTRPTPKPTPQPTPPPPPPLATEFRTPPPPPTPERPSTRLTTAEPATSTSARGVTVDNR
IQTDPQKPRGDVFIPRQPFNDLFEIFEIERGVSADDEAKDDPGVLVHSCNFDHGLCGWIR
EKDSDLHWEPIKDPAGITKMIKGLDKKLYDEKLKELGYSAWRKED
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccccctggcgctggagctcctgtcctcgctctacctgcagacggccgccgag
ttcgacgggaggtggcccaggcaaatagtgtcatctattggcctatgtcgttatggtggg
agaattgactgctgctggggctgggctcgccagtcctggggacagtgtcaacctttctac
gtcttaaggcagagaatagccagaataaggtgccagctcaaagctgtgtgccagccacag
tgcaaacatggtgagtgtattgggcctaacaagtgcaagtgtcaccctggatatgccgga
aaaacctgcaaccaagatgagcacttctacccaactcctcttgaccaaggcagtgaacag
cctcttttccaacccttggatcatgaagccacaagtttacctgcaagggatctaaatgag
tgtggcctgaagcctcggccctgtaagcacaggtgcatgaacactttcggcagctacaag
tgctactgtctcaatggatatatgcttatgccggatgggtcctgctcaagtgccctaaca
tgctctatggcaaactgtcagtatggctgtgatgttgttaaagggcaagtccggtgccag
tgcccctccccaggtctgcaactggctcctgatgggaggacctgtgtggatgtcgatgaa
tgtgctactggaagagtctcgtgccctagatttagacagtgtgtcaacacttttgggagt
tacatctgcaagtgtcataaaggcttcgacctcatgtacattggaggcaaataccaatgt
cacgatatagatgaatgctcccttggtcagcatcagtgcagtggctttgctcgatgttac
aacatacacgggtcctataagtgtaaatgtaaagatggataccatggtgatggactcagt
tgtgtctatatccccaaagtcatgattgagccttcaggaccaattcatgtaccaaaagga
aatggtaccattttaaagggtgatggaggagataattggattcctgatgtcagaagtaca
aggtggcctctgaagacaccatatattcctcctgccattaccaacaggcctacttctaag
ccaacaacaagacctacaccaaagccaacaccacagcccactcctccaccaccaccaccc
ctggcaacagagttcagaacacctccacctccaccaaccccagaaaggccatccaccaga
ctgacaactgcagaaccagctacgagtacatctgcaagaggggttacagttgacaacagg
atacagacagatcctcagaaacccagaggagatgtattcattccacggcagcctttcaat
gacttgtttgaaatatttgaaatagaaagaggagtcagtgcagatgatgaagcaaaggat
gatccaggtgttctggtacacagttgtaattttgaccacggactttgtggatggatcagg
gaaaaagacagtgacttacactgggaaccaatcaaggacccagcaggaatcacaaagatg
attaaagggttggacaaaaagctctatgatgaaaaattaaaggaactgggatattcagcc
tggagaaaagaagactga
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