KEGG   Sciurus carolinensis (gray squirrel): 124994518
Entry
124994518         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: signal recognition particle subunit SRP72-like
  KO
K03108  signal recognition particle subunit SRP72
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03060  Protein export
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    124994518
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ncar02044]
    124994518
Secretion system [BR:ncar02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   124994518
SSDB
Motif
Pfam: TPR_19 SRP72 TPR_14 ANAPC3 TPR_2 SRP_TPR_like TPR_8 TPR_12 TPR_1 TPR_9 TPR_6 ARM_TT21 BTAD TPR-S ARM_TT21_5th TPR_11 TPR_Slam HrpB1_HrpK TPR_10 SNAP ARM_TT21_N AimR TPR_7 HAT_PRP39_C TPR_MalT DUF627 CorA CCDC-167 NatA_aux_su
Other DBs
NCBI-GeneID: 124994518
NCBI-ProteinID: XP_047422513
LinkDB
Position
10:complement(96697036..96727658)
AA seq 671 aa
MASGGSGGVSVPALWSEVNRFGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGS
FKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYGQVLY
RLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCY
NAACALIGQGQLNQAMKILQKAEDLCRRSFSEDSDGTEEDPQAELAIIHGQMAYILQLQG
RTEEALQLYNQIIKLKPTDVGLLAVIANNIITINKDQNVFDSKKKVKLTNAEGVEFKLSK
KQLQAIEFNKALLAMYTNQAEQCRKISAXLQSQSPAHLLPVLIQAAQLCREKQHTKAIEL
LQEFSDQHPENAAEIKLTMAQLKISQGNISKACLILRSIEELKHKPGMVSALVTMYSHEE
DIDSAIEVFTQAIQWYQNHQPKSPAHLSLIREAANFKLKYGRKKEAISDLEQLWKQNPKD
IHTLAQLISAYSLVDPEKAKVLSKHLPSSDSMSLKVDVEALENSPGATYIRKKGGKVTGD
SQPKEQGQGDVKKKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGK
GTQGATAGASSELDASKTVSSPPTSPRPGSAATVSASTSNIIPPRHQKPAGAPATKKKQQ
QKKKKGGKGGW
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcgagcggcggcagcgggggggtttcggtgcctgcgctgtggagtgaggtgaaccgc
ttcgggcagaacggcgacttcacacgcgctctcaagaccgtcaacaagatactgcagatc
aataaggatgatgtaactgctttgcactgtaaggtggtctgccttatccagaatggaagt
ttcaaagaagccttgaatgtcatcaatactcataccaaagtgttagccaataactctctg
tcctttgagaaggcatactgtgagtacaggctgaacagaattgagaatgccttgaagaca
atagaaagtgccaaccagcagacagacaaattaaaggagctttatggacaagtgctatac
cgtttggaacgttatgatgaatgcttagctgtgtatagggatcttgtccgaaactctcaa
gatgactatgatgaggagaggaaaacaaacctttcagcagtggttgcagctcaaagcaat
tgggaaaaagtggttccagagaacttgggcctccaagaaggcacacatgaactgtgctac
aatgctgcatgtgccctgataggacaaggccagctgaaccaggcaatgaaaatcctacaa
aaagctgaagatctttgccgacgttctttttcagaagactctgatgggactgaggaagac
ccacaggcagaactggccattattcatggtcagatggcctatattctgcagcttcagggt
cgtacagaggaggctttgcaactttacaatcagataataaaactaaagccaactgatgtg
ggattgttagctgtaattgcaaataacatcattaccattaataaggaccaaaatgtcttt
gactccaagaagaaggtgaaattaaccaatgcagaaggagtagagtttaaactttctaag
aaacaactgcaggctatagaatttaacaaagctttacttgctatgtacacaaaccaggca
gaacaatgtcgcaaaatatctgctnagttacagtcccaaagtcctgcacatctcctgcct
gtgttaatccaagctgcccagctctgccgtgaaaagcagcatacaaaagcaatagagcta
cttcaggaattttcagatcagcatccagaaaatgcagctgaaattaagctgaccatggca
caattgaaaatttcccaaggtaatatttccaaagcatgtttaatattgagaagcatagag
gagttaaagcataaaccaggcatggtatctgcattagtgaccatgtacagccatgaggaa
gatattgatagtgccatcgaggtcttcacacaagccatccagtggtatcaaaaccatcag
cccaaatctcctgctcatttgtcattgataagagaagctgcaaacttcaaactcaaatat
gggcggaagaaggaggcaattagtgacctagaacagctatggaaacaaaatccaaaagat
attcacacactggcgcagcttatttctgcttactcacttgtagatccagagaaagctaaa
gttcttagtaaacacttgccctcatcagatagtatgtctctaaaagtagatgtcgaggct
cttgaaaattctcctggtgctacgtatattcggaagaaaggtggaaaagttactggagat
agtcaaccaaaggaacaaggacagggagatgtgaaaaagaagaagaagaaaaagaaggga
aaactacctaagaattatgacccaaaagttaccccagatccagaaagatggctaccaatg
cgagaacgttcttactatagaggaagaaaaaagggtaaaaagaaggatcagattggaaaa
gggacccagggagcaactgcaggggcctcatctgaactggatgccagtaaaactgtgagc
agcccacccacctccccaagacctggcagtgcagcaacagtctctgcctctacaagtaac
atcatacccccaagacaccagaaacctgcaggggctccggcaacaaaaaagaaacagcaa
cagaaaaagaagaaaggaggaaaaggtggctggtga

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