Sciurus carolinensis (gray squirrel): 124994560
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Entry
124994560 CDS
T08117
Name
(RefSeq) potassium voltage-gated channel subfamily D member 3 isoform X1
KO
K04893
potassium voltage-gated channel Shal-related subfamily D member 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124994560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124994560
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
124994560
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GFIT
Motif
Pfam:
Ion_trans
DUF3399
BTB_2
Ion_trans_2
Shal-type
BTB_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124994560
NCBI-ProteinID:
XP_047422589
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All DBs
Position
1:109466184..109681184
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AA seq
655 aa
AA seq
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MAAGVAAWLPFARAAAIGWMPVANCPMPLAPADKNKRQDELIVLNVSGRRFQTWRTTLER
YPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAF
YGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQESMPSLSFRQTMWRAFENPHTST
LALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYSVAFFCLDTACVMIFTVE
YLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKF
SRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWY
TIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRR
AQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELAGTPEEEHMGKTTSLIESQHHHLL
HCLEKTTGLSYLVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHP
GLTTTCCSRRSKKTTHLPNSNLPATRLRSMQELSTIHIQGSEQPSLTTSRSSLNLKADDG
LRPNCKTSQITTAIISIPTPPALTPEGESRPPPASPGPNTNIPSIASNVVKVSAL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggagtcgcagcctggctgcctttcgcccgggctgcggccattgggtggatg
cccgtggccaactgccccatgcctctagccccggccgacaagaacaagcggcaggatgag
ctgatcgtcctcaacgtgagtgggcggcggttccagacctggaggaccacgctggagcgc
tacccagacacgctgctgggcagcacagagaaggagttcttcttcaacgaggacaccaag
gagtacttctttgacagggacccagaagtgttccgctgcgtgctcaacttctaccgcacg
gggaagctgcactacccgcgctacgagtgcatctcggcctatgatgacgagctggccttc
tatggcatcctccctgagatcatcggagactgctgctacgaggagtacaaagaccgcaag
cgcgagaatgccgagcggctcatggatgacaatgactcggaaaacaaccaggagtccatg
ccctcgctcagcttccgccagaccatgtggcgggccttcgagaacccccacaccagcacc
ctggccctggtcttctactacgtaactggcttcttcattgctgtctcggtcatcaccaac
gtggtggagacggtgccttgtggcacagtcccgggcagcaaggagctgccgtgcggagag
cgctactcggtggccttcttttgcctggacacggcctgcgtcatgattttcacggtggag
tacctcctccggctcttcgcggcgcccagccgctaccgcttcatccgcagcgtgatgagc
atcatcgatgtagtggccatcatgccctattacatcggcctggtcatgaccaacaatgag
gacgtgtctggggcctttgtcacgctccgggtcttccgcgtctttaggatcttcaagttc
tcccgccactcccagggcctgcggatcctgggctacaccctgaagagctgtgcctctgaa
ctgggctttctcctcttctccctcaccatggccatcatcatctttgccactgtgatgttt
tatgcggagaagggctcctctgccagcaagttcacaagcatccctgcctctttttggtac
accattgtcaccatgaccacactgggatatggagacatggtgccaaagacaattgcagga
aagatcttcggctccatctgctccctgagtggtgttctggtcattgccctgccagtccct
gtgattgtttccaacttcagcaggatttaccaccagaatcagagagccgataaacgcagg
gcacaaaagaaggcccgccttgccaggatccgtgtggccaaaacaggaagctccaacgct
tacctgcacagcaagcgcaatgggctcctcaacgaggcactggaactggcgggtacccca
gaagaggagcatatgggcaagaccacatcactcatcgagagccagcaccaccatctgctg
cactgcctggaaaagaccactgggttgtcctatcttgtggatgatcccctgttatctgta
cgaacctccaccatcaagaaccatgagtttattgacgagcagatgtttgagcagaactgc
atggagagctcaatgcagaactacccatccacaagaagtccctctctgtccagtcaccca
ggcctcactaccacctgctgctcccgtcgtagtaagaagaccacacacctccccaattct
aacctgccagccactcgcctgcgcagcatgcaggaactcagcacgatccacatccagggc
agtgagcagccctcccttactaccagtcgctccagccttaatttgaaagcagatgacgga
ctgagaccaaactgcaaaacatcccagatcaccacagccatcatcagcatccccactccc
ccagcgctaaccccagagggggaaagtcggccaccccctgccagcccgggccccaacacg
aacattccttccatagccagcaatgttgtcaaggtctctgccttgtaa
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