KEGG   Sciurus carolinensis (gray squirrel): 124994600
Entry
124994600         CDS       T08117                                 
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ncar04990]
    124994600
Domain-containing proteins not elsewhere classified [BR:ncar04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   124994600
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR75_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 Ge1_WD40 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_RIG_1st WD_LRWD1 RMC1_N PROPPIN WD40_RFWD3 WDR54 Beta-prop_ELP1_2nd Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_ELP1_1st Beta-prop_WDR11_1st BBS2_Mid PQQ
Other DBs
NCBI-GeneID: 124994600
NCBI-ProteinID: XP_047422668
LinkDB
Position
10:134481804..134522210
AA seq 606 aa
MPYEIKKVFASLPQVERGVSKILGGDPKGNNFLYTNGKCVILRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVV
GEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFK
FKFTIGDHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKICALGESKAHDGGIYAI
SWSPDSTHLLSASGDKTSKVWDVGVNSVVSTFPMGSSVLDQQLGCLWQKDHLLSISLSGY
INYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFS
GKGHTNQVSRMTVDESGQLVSCSMDDTVRYTNLMLRDYSGQGVVKLDVQPKCVAVGPGGY
AVVVCIGQIVLLKDQKKCFSIDSPGYEPEVVAVHPGGDTVAIGGTDGNVRVYSILGNTLK
DEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWTITY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgccgtacgagatcaagaaggtgttcgccagcctcccccaggtggagaggggcgtttcc
aaaatcctcggcggcgaccccaagggcaacaattttctgtacaccaatggcaagtgcgtc
atcctgaggaacatcgataacccagctattgctgacatctacacggagcacgcccaccag
gtggtagtggctaagtacgcacccagtggcttctacatcgcctccggagatgtctctggg
aaactgcggatctgggataccacgcaaaaggaacatctgctgaagtatgagtaccagcct
tttgccgggaagatcaaggacattgcctggactgaagacagtaagaggatcgccgtggtc
ggggaaggaagggagaagtttggtgcagtcttcctgtgggacagtggctcttccgtgggt
gagatcacaggacacaacaaagttatcaacagcgtggacatcaagcagagcaggccatac
cggctggcgacagggagtgatgacaactgtgctgcattctttgagggacccccattcaag
ttcaagtttacaattggtgaccacagccgctttgtcaactgtgtgcgattctctcccgac
gggaacagatttgccactgccagtgctgacggccagatatacatctatgacgggaagaca
ggagagaagatttgtgcactgggagaaagcaaggcccacgacggaggcatttatgctatt
agttggagccctgatagcacccatttgctctctgcctccggagacaaaacctctaaggtt
tgggatgttggcgtgaactctgttgtcagtacgtttcccatgggctccagtgtcctggac
cagcagctgggctgcctgtggcagaaggaccaccttctcagcatctccctgtctgggtac
atcaactacctggacaagaacaaccccagcaagcccctgcgtgtcatcaagggtcacagt
aagtcaatccagtgtctgacggtgcacaaaaacggcggcaagtcctacatctactctggg
agccacgacggacatattaattactgggattcagagacaggggaaaacgactccttctct
gggaaaggccacacgaatcaggtgtccaggatgactgtcgacgagtctgggcagctcgtc
agctgcagcatggacgacactgtgcgctacaccaacctcatgctgagggactacagtgga
caaggagttgtgaaactggacgttcaaccaaagtgcgtagccgtcggccctgggggatac
gccgtggtcgtgtgcatcgggcagattgtcctgctaaaggaccagaagaagtgcttcagc
atcgacagtcctggctacgagcctgaagttgtggcagtacaccctggcggggacacagtg
gctatcggaggcacggatggcaatgtccgtgtgtactccatcctgggcaacacactgaag
gacgagggcaagctcctggaggccaagggccccgtgacagacgtggcctactcccacgat
ggcgccttcctggctgtgtgtgatgccagcaaggtggtcaccgtgttcagtgttgctgac
ggctactcggagaacaacgttttttacggacaccatgcaaaaatcgtctgcctggcctgg
tcaccagacaacgagcactttgcctctggtggcatggacatgatggtgtacgtctggacc
ctgagtgacccagaaaccagagtcaagatccaagatgcacaccggctacaccatgtcagc
agcctggcctggcttgacgagcacacgctggtcaccacctcccacgacgcctctgtcaag
gagtggacaatcacctactga

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