Sciurus carolinensis (gray squirrel): 124994628
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Entry
124994628 CDS
T08117
Name
(RefSeq) F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124994628
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124994628
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
LRR_4
Hemerythrin
LRR_At5g56370
LRR_8
F-box_4
Motif
Other DBs
NCBI-GeneID:
124994628
NCBI-ProteinID:
XP_047422713
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Position
10:129713947..129760952
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AA seq
691 aa
AA seq
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MAPFPEEVDVFTAPHWRMKQLVWLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI
ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT
RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNQAEER
QKFFKYSVDEKSDIEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAK
TGSLWKHLYPVHWARGDWYSGPATELDTEPDEEWVKSRKDESRAFQEWDEDADIDESEES
GEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH
LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQTGFLK
TSTSKITSTTWKNKDITMQSTKQYACLHNLTDKGIGEEINNEHTWTKPVSSESFSSPYVW
MLDAEDLADIEDAVEWRHRNVESLCVMETASNFGCPSTACYSKDIVGLRTSVCWQQHCAS
PAFAYCGHSFCCTGTALRTMSALPESSAACRRAVRTTLPRGKDTVHFGSEKPDQETGRVL
LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTVTGAGLQDLVSACPSLNDEYFY
YCDNINGPHADTASGCQNLQCGFRACCRSGE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctttccccgaagaagtggatgtcttcaccgccccgcactggcggatgaagcag
ctggtgtggctctactgcgacaagctttctaaaaccaacttttccaacaacaacgatttc
cgtgctcttctgcagtctttgtatgctactttcaaggagttcaaaatgcatgagcagatt
gaaaatgaatacattattggtttgcttcagcaacgcagccagaccatttataatgtacat
tctgacaataaactctctgagatgcttagcctctttgaaaagggactgaaaaatgttaag
aatgaatatgagcagttaaattatgcaaaacagctgaaagagcggttagaggcttttaca
agagattttcttcctcacatgaaagaggaagaagaggttttccaacccatgttaatggaa
tattttacctatgaagaacttaaggatattaaaaagaaagtgattgcacagcactgctct
cagaaggataccgccgaactccttagagggcttagcctgtggaatcaagctgaagagcga
cagaagtttttcaagtattctgtggatgaaaagtcggacatagaagcagaagtgtcagaa
cactccacaggtataacccatcttcctcctgaggtaatgctgtcaattttcagttatctt
aatcctcaagaattatgtcgatgcagtcaagtcagcactaaatggtctcaactggcaaaa
actggatcactttggaaacatctttatcctgttcattgggccagaggtgactggtatagt
ggtcctgctactgaacttgatactgagcctgatgaggaatgggtgaaaagtaggaaagat
gaaagtcgtgcttttcaggaatgggatgaagatgctgatatagatgagtctgaagaatct
ggagaagaatcaattgctatcagcattgcacaaatggaaaagcgtttactccatggctta
attcataatgttctaccatatgttggtacttccgtaaaaactttagtattagcatacagc
tctgcagtttccagcaaaatggttaggcagattttagaactttgtcctaacttggagcat
ctggatcttacccaaactgacatttcagattctgcatttgacagttggtcttggctgggt
tgctgccagagtcttcggcatcttgatctgtctggatgtgagaaaatcacagatgtggct
ctagaaaagatttccagggctcttggaattctgacatctcatcagactggctttttgaaa
acttctacaagcaaaattacttcgactacatggaaaaataaagacattaccatgcagtcc
accaagcaatatgcctgtttgcacaatttaactgacaaaggcattggagaagaaataaat
aatgaacacacctggactaagcctgtttcctctgaaagtttctcttctccttatgtgtgg
atgttagatgctgaagatttggctgatattgaagatgctgtagaatggagacatagaaat
gttgaaagtctctgtgtaatggaaacagcatccaactttggctgtccctcaactgcttgt
tacagtaaggatattgttggactaaggactagtgtctgttggcagcagcattgtgcttct
ccagcttttgcatattgtggtcattcattctgttgcacaggaacagccctaagaactatg
tcagcactcccagagtcttctgcagcatgcagaagagcagtaaggactacgttgcctagg
ggaaaggacacagttcactttgggagtgaaaaacctgatcaagagactggccgtgtactt
ttgtttctcagtctttctggatgttatcagatcacagatcatggtctcagggttttaact
ctgggaggagggctgccttacttggagcaccttaatctctctggctgtcttactgtaacc
ggagcaggcctgcaggatttggtatcagcatgtccttctctaaatgatgaatacttttac
tactgtgacaacattaacggtcctcatgctgataccgccagtggatgccagaatctgcag
tgtggttttcgagcctgctgccgctctggcgaatga
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