Sciurus carolinensis (gray squirrel): 124994653
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Entry
124994653 CDS
T08117
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124994653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124994653
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124994653
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
124994653
NCBI-ProteinID:
XP_047422792
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All DBs
Position
10:135301839..135305960
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AA seq
303 aa
AA seq
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MAPAADMTSLPLSVKVEDSAFGKPAGAGAGQAPTAAAATAAAMGADEEGAKPKVSPSLLP
FSVEALMADHRKPGAKENALAASEGAQAAGGPVQPLGARPGPLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKPERTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
AAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYSASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgatatgacttctttgccactcagtgtcaaagtggaggactctgcc
ttcggcaagccggcgggggcaggcgcgggccaggcccccacagctgccgcggccacggcg
gccgcgatgggcgcagatgaggagggggccaagcccaaagtgtccccttcgctcctgccc
ttcagcgtggaggcactcatggccgaccacaggaagcctggggccaaggagaacgcactg
gcggcctccgagggcgcgcaggcggcgggtggccccgtacagcccctgggcgcccggccc
ggccctctaggcgctcccgacgcgccctcctcgccgcggccgctgggccatttctccgtg
ggaggactcctcaagctgccagaggatgctctggtcaaggccgagagccccgagaagcca
gagaggaccccgtggatgcagagccctcgcttctccccgcccccagccaggcggctgagc
ccaccggcctgcaccctgcgaaagcacaagaccaaccgaaagccgcggacgcccttcacc
accgcgcagctgctggcgctcgagcgcaagttccgccagaagcagtacctgtccatcgcc
gagcgcgcggagttctccagttcgctcagcctcaccgagacgcaggtgaagatctggttc
cagaaccgccgcgccaaggccaagagactgcaggaagcagagctggagaagctgaagatg
gcagccaagcccatgctgccgcctgctgccttcggcctttctttccctcttggcggtcct
gccgcagtggcagccgcggcgggagcctcactctacagtgcctctggccccttccagcgg
gctgcgctgccagtggcacctgtgggactctacacggctcacgtgggctacagcatgtac
cacctgacatag
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