Sciurus carolinensis (gray squirrel): 124994720
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Entry
124994720 CDS
T08117
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1A-like isoform X1
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124994720
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124994720
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
124994720
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
124994720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
124994720
NCBI-ProteinID:
XP_047422909
EnsemblRapid:
ENSSCRG00010014972
LinkDB
All DBs
Position
10:26765301..26998338
Genome browser
AA seq
1029 aa
AA seq
DB search
MMSSVSTESRLQQAVSLQGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDE
ASAVQNYVEHMLFLLIEEQAKDAAMGPILEFVVSENIMEKLFLWSLRREFTDETKMEQLK
MYEMLVTQSHQPLLHHKPILKPLMMLLSSCSGTATPAVEGKLVVLLNQLCCILAKDPSIL
ELFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENSMVAHHIVENT
YFCPVLATGLSGLYSSLPTKLEEKGEEWHCLLKDDWLPLPPLVQFLNSLEFCNAVIQVAH
PLIRNQLVNYIYNGFLVPVLAPALHKVTVEEVMTTTAYLDLFLRSISEPALLEIFLRFIL
LHQHENVHILDTLTSRINTPFRLCVVSLALFRTLIGLHCEDVMLQLVLRYLIPCNHMMLS
QRWAVKERDCYSVSAAKLLALTPVCCASGITLTLGNQERDYILWSKWTHDASGPVEQPAP
APAACIVECGKALDVSYLQYLWEAHANILRCMRDCRVWSALYDGDSPDPETFLRSAAEES
PARPAPRLPQRPPGAAKARSQTELEWDDSYDTGMSAGDVGSPGPRHLAEAPGPPAPREPP
KHIQEMKRNAIQLFRGAYIEESDFQDDVMVYRLCAEKDADDAAGRPQHKPAGSPAQAPPE
AQRPRVDNGPLPSPQQRTDAEGQQRDSTHPLLDMSEPPKQENEPEVASEPDSELVALVPE
AEQRPELAEVHPESEDFIAQCDQIIKELDSGTESLVDQHFPEDPLLLTEEEEGREGEGRG
EQKGAEEEREKDLEEDQEDFDSFMAEAPAAEPVCSPFGVREEAACAGPHAGRTQSTPFTG
PFISVVLSKLENMLENSLHVNLLLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSLYQV
LASVKNKIEQFASVERDFPGLLVQAQQYLLFRVDVSDMTPAAVTKDPIQEASRTGSGKNF
LDGPPRVLQPFLANRAKVVGAPPNLPLPVRNTMLAAALFPEFLKELAALAQEHSILCYKI
LGDFEDSYC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatcggtttcgacagaaagcagactccagcaggctgtgagcctgcagggagtt
gaccccgaaacatgcatgattgtgtttaaaaaccactgggcacaggttgtgaaaatcctg
gagaagcacgaccccttgaagaacacccaggcaaaatatgggtccatccccccggatgag
gccagtgccgtgcagaactatgtggaacacatgctcttcttgctaattgaggagcaagcc
aaggatgcggcaatggggccgattctggaatttgtggtctctgagaacatcatggagaag
ctcttcctgtggagcttgagacgggagtttaccgatgagactaaaatggagcagctgaag
atgtatgagatgttggtcacccagtcgcaccagcccctgctgcaccacaagcccatcctg
aagcctctgatgatgttgctgagctcctgttcgggcacggccacccccgccgtggagggg
aagctggtggtcctgctcaatcagctctgttgcatccttgccaaagatccctccatcctg
gaactctttttccacactagtgaggaccaaggggctgccaacttcctcatcttctccctt
ctgatccccttcattcatcgagaggggacggtgggccaacaggcgcgggatgctctgctg
tttatcatgtctctctctgccgagaacagcatggtggcccatcacatcgtggagaacacc
tacttttgtccagtgctcgccaccgggctcagtgggctctactcttccctgcccaccaag
ctggaggagaagggcgaggagtggcactgcctgctgaaggacgactggctcccgctgccg
cccctggtgcagttcctgaactccctggagttctgcaacgcggtcatacaggtggcccat
cccttgattcgcaatcagcttgtcaattacatctacaatggattcctggtgcccgtcttg
gctcctgctcttcacaaggtgaccgtggaggaggtcatgaccacgaccgcgtacctggac
cttttcctgcgcagcatctccgagccagcgctgcttgagatcttcctcaggttcatcctg
ttgcaccagcacgagaatgtccacattctagacactctcaccagccgaatcaacaccccg
tttcggctctgcgtggtgtccctggcgctcttcagaaccctcatcggcttgcattgtgaa
gacgtgatgttgcaactagttttaaggtatctgatcccctgcaaccacatgatgctcagt
cagcggtgggcggtgaaggaaagggactgctactccgtgtctgcggccaagctgctggcc
ttgacccctgtctgctgcgccagcgggatcactctgacgcttggaaaccaggagagggat
tatattctctggtcgaagtggacgcatgatgcctcagggcccgtggagcagcccgcgccc
gcgcccgcggcctgcatcgtggagtgcggcaaggccctggacgtcagctacctgcagtac
ctgtgggaggcgcacgccaacatcctgcgctgcatgagggactgccgcgtctggtccgcc
ctgtacgacggcgactcgcccgaccccgagacgttcctgcggagcgcggcggaggagagc
ccggcgcgccctgcgccccggctgccgcagcgcccgcccggggcggccaaggcccggagc
cagacggagctggagtgggacgacagctatgacaccgggatgtccgcgggcgacgtgggc
tccccggggccccgccacctcgcggaggcccccggcccgccggccccccgggagcccccg
aagcacatccaggagatgaagaggaacgccatccagctcttcaggggcgcctacatcgag
gagtccgacttccaggacgacgtgatggtgtaccggctctgtgccgagaaggacgctgac
gacgccgccgggaggccgcagcacaagcccgcagggtccccggcccaggccccgcccgag
gcgcagcggccccgcgtggacaacggccccctccccagcccgcagcaaaggacagacgca
gagggacagcagagggacagcacgcaccccttgctggacatgtccgagccaccaaagcaa
gagaatgagcctgaggtcgcctccgaaccggactcagagctcgtggccctggtgcccgag
gcagagcagaggccagagctggccgaggtccaccctgagagtgaggacttcattgcccaa
tgtgaccagatcatcaaggaactggactcgggcactgagagcctggtggaccagcatttc
cccgaggaccccttgcttctcacagaggaggaagaagggagggaaggagagggcagagga
gaacagaagggggcagaggaggagcgggagaaggacctggaggaggaccaggaggacttt
gactccttcatggcggaagctcctgctgcagagcccgtgtgctccccctttggggtgaga
gaggaggctgcctgtgccgggccccatgctgggagaactcagagcaccccgttcacaggc
ccgttcatcagcgtggtcctgtcaaagctggagaacatgctggagaactccctgcatgtt
aacttgctgcttattgggatcatcacgcagctagccagctacccccagccactcctgcgc
tccttcctgctcaacaccaacatggtcttccagccgagcgtacgctccctctatcaggtc
ctcgcgtctgtgaaaaacaagatcgaacagttcgcctcggtggagagagacttcccaggc
ctcctcgtccaagcccagcagtacctgctcttccgggtggacgtgtctgacatgacccct
gccgcagtaaccaaagatcccattcaggaggcttccaggacaggaagtggcaagaacttt
ttggatggtcccccacgagtgcttcagcccttcctggccaacagagccaaggtggtaggg
gcacccccaaacctgcccctgcctgtgaggaacaccatgctggccgctgcgctcttcccc
gagttcctgaaggagctggctgccctggcccaggaacactccattctgtgctacaagatc
ctgggtgacttcgaggactcctattgttag
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