Sciurus carolinensis (gray squirrel): 124994829
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Entry
124994829 CDS
T08117
Name
(RefSeq) prominin-1-like isoform X1
KO
K06532
prominin 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124994829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124994829
04090 CD molecules [BR:
ncar04090
]
124994829
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124994829
CD molecules [BR:
ncar04090
]
Proteins
124994829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF2207_C
Tweety
DUF948
Baculo_PEP_C
Laminin_II
DUF1664
ATG17_like
RH1
ApoLp-III
Filament
Apolipoprotein
SUR7
ZapB
CYP38_PsbQ-like
Spike_torovirin
DUF3584
Fez1
CREPT
CENP-Q
APG6_N
EzrA
Motif
Other DBs
NCBI-GeneID:
124994829
NCBI-ProteinID:
XP_047423043
LinkDB
All DBs
Position
10:129305708..129429777
Genome browser
AA seq
858 aa
AA seq
DB search
MAFLLAALLLLGLCGNTISGGESPPTDTSGSLNFELPTSKYETPDTYTAGSIGALFQMVH
IFLHMVQPNDFPEESIRKIIRKNFDLSTDYNEIAYYEIGIIICAFLGLLFIILVPVVGYF
FSICRCCNKCGGKMHQREKENGPFQRKCFAVSLLVICVLISIGILYGFVANHQVRHRIKR
TQKLVVSNFKDLRTLLNEAPQQIDYIVAQFNTTKERAFSDLDGIHSLLGGGILERLKPKV
IPVLDEIQAIATEIKETKEALEDMSQNLQSLKDGSAQLSSSLATVKDSMQESLRSPECLL
PQISEVCKSIESSLSQLESNPDLSSLPPVDKELENVNNVFKNDLSGLVQKGYTSFNDIPK
RVKSQTTPMVAEIKNVLNNLGDTVNDVAKDIPIQDSLSEFSDRIDSVERQVHQRLHKAEE
IDSYWWLCGLIVCFLLSLIVTFFYLGLLCGICGYDKHATPTTRGFVSNTGGIFLMVGVGL
SFLFCWIVMILVVVSFVIGVNVEKLVCEPYANRKLFRILDTPYLLNKNWKYYVSGMVLKK
SDIELTFEQIYSDCKNSRGIYSTFRLENRFNISDSLDIQKHTGNINSRFENMDVKLHGIV
LLDEAGSKIIQDFANSGIDKIEYNTYLAQSKKSPGKVNLLSFSYELDAKADHLPPGELKE
SMKANAGTIRAIHEHQVVPMLQTENNLQQKIKILKHTSKGLSGKVTKILFALESVQHFIT
NNISSIVVEETKKYGRTILGYFEHYLQWVELAVTEKMVSCKPVATAMDSAIKVILCGFVV
DPLNLFWFGIGKATFLLLPALIIAVKLAKYYRRMDSEDVYEDVETVPMKNMENGNNGYHK
DHLYGVHNPVMTSPSHYQ
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcctttctgcttgctgcgctgctgctgctggggctttgtgggaataccatctccgga
ggggagtctcccccaacagacacttctggctcgttgaattttgaattgcctacatcgaaa
tatgagaccccagacacctacacagctgggtccataggcgcgctcttccaaatggtgcac
atcttcctccacatggtgcagcccaacgatttccctgaagaatccatcagaaaaatcata
cggaagaactttgatctctcaactgattataatgagatcgcctactatgagatcggcatt
atcatatgtgctttcctggggctgttatttattattctggtacctgtggtgggttatttc
ttttccatatgtcgttgctgtaacaaatgtggtggaaaaatgcatcagcgagagaaggag
aacgggcccttccagaggaagtgcttcgccgtctccctcctggtgatctgtgtgctcata
agcattggcatcctctacggctttgtggccaatcaccaggtgagacaccggatcaaaagg
actcagaagctggttgtgagcaacttcaaagacctgcggaccctcctgaatgaagcgccg
cagcaaatcgactatatcgtggctcagttcaacaccaccaaagagagggccttctcagat
ctggacggtattcattcattgctgggaggtggaattctggagcgactaaaacctaaggtg
atccctgttcttgatgagattcaggccatagccacagaaatcaaagagaccaaggaggcc
ctggaggacatgagccagaatctgcagagcctgaaggacggaagcgcacagctcagcagc
agcctggcaactgtgaaggacagcatgcaggagtccctgaggagccccgaatgcctcctg
ccacaaataagtgaagtctgcaagagcattgagtcgtctctcagccagctggagagcaac
cccgacttgagttcgcttccacctgtggacaaagaacttgaaaatgttaataatgttttt
aaaaatgatttgagtggcctggtccaaaagggctacacatccttcaacgacatacctaag
agggtgaaaagccaaaccacgcccatggtagcagaaatcaaaaatgtcttaaataacctt
ggtgacactgtcaatgacgtagccaaagacattcctattcaggactctctgtcagagttc
agcgatcgcatcgattctgttgaaagacaagtccaccagaggttgcataaggcggaggaa
attgactcctactggtggctgtgtggcttgatcgtctgctttctgctgtcactcatcgtg
actttcttttacctgggcttgctgtgtggcatctgtggctatgacaagcacgccacccca
accactagaggcttcgtgtccaacacaggaggtatcttcctcatggttggggttggattg
agtttccttttttgctggatagtcatgatcctcgtggttgtttcttttgtcattggtgta
aatgtggaaaaactcgtctgcgaaccttacgcaaacaggaagttattccggattttggat
actccctacttactaaataagaactggaaatactacgtctctggcatggttcttaaaaaa
tcagatatcgagctcacttttgaacaaatttacagcgattgcaaaaacagtagaggaatt
tactccacatttcgactcgagaaccgcttcaacatcagtgatagtctcgacattcagaag
cacactggcaacataaacagtcgatttgaaaatatggatgttaaacttcatggcattgtt
cttctggacgaggcaggaagtaaaatcattcaggacttcgctaatagtggaatcgacaaa
atagagtacaacacctacttggctcagagtaaaaaatcccctgggaaagtgaatctttta
tccttttcctatgaactggacgcaaaagcggaccatctgccccctggagagttaaaagag
tccatgaaggcaaatgcaggaactatcagagcaattcatgagcatcaagtggttcccatg
ttgcagacagagaacaacctacaacaaaagatcaagatacttaaacacacgagcaaggga
ctgtcagggaaagtgaccaagatcctgtttgctttggaatctgttcagcacttcataaca
aacaatatttcctccattgttgtggaagaaactaagaagtatgggagaacaatactggga
tattttgaacactacctacagtgggtggagctggctgtcactgagaagatggtgtcctgc
aagcccgtggccaccgccatggattctgccattaaagtgattctgtgtggcttcgttgta
gaccctctgaatttgttttggtttggcataggaaaagctactttccttctacttccggct
ttaattatcgctgtaaagctggccaagtactaccgccgaatggactcggaggatgtgtat
gaagatgttgaaactgtacccatgaaaaatatggaaaatggtaataatggttatcataaa
gatcatttatatggtgttcacaatcctgttatgacaagcccatcacattatcagtaa
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