Sciurus carolinensis (gray squirrel): 124994855
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Entry
124994855 CDS
T08117
Name
(RefSeq) netrin receptor UNC5C isoform X1
KO
K07521
netrin receptor unc-5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124994855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124994855
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124994855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPA
ZU5
Death
Ig_3
I-set
TSP_1
TSP1_spondin
Ig_2
ig
TSP1_CFP_C
TSP1_ADAMTS
ABC2_membrane_5
Motif
Other DBs
NCBI-GeneID:
124994855
NCBI-ProteinID:
XP_047423086
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All DBs
Position
10:60241090..60590810
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AA seq
950 aa
AA seq
DB search
MRKGLRATAARCGLGLGYVLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEP
LPHFLIEPEEAYIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSGLIVR
EVSIEISRQQVEELFGPEDYWCQCVAWSSAGTTKSRKAYVRIAYLRKTFEQEPLGKEVSL
EQEVLLQCRPPEGIPVAEVEWLKNEDIIDPVEDRNFYITIDHNLIIKQARLSDTANYTCV
AKNIVAKRKSTTATVIVYVNGGWSTWTEWSVCNSRCGRGYQKRTRTCTNPAPLNGGAFCE
GQSVQKIACTTLCPVDGRWTSWSKWSTCGTECTHWRRRECTAPAPKNGGKDCDGLVLQSK
NCTDGLCMQSFIYPISTEQRTQNEYGFSSAPDSDDVALYVGIVIAVIVCLAISVVVALFV
YRKNHRDFESDIIDSSALNGGFQPVNIKAARQDLLAVPPDLTSAAAMYRGPVYALHDVSD
KIPMTNSPILDPLPNLKIKVYNTSGAVTPQDDLSEFTSKLSPQMTQSLLENEALNLKNQS
LARQTDPSCTAFGTFNSLGGHLIVPNSGVSLLIPAGAIPQGRVYEMYVTVHRKENMRPPM
EDSQTLLTPVVSCGPPGALLTRPVILTLHHCADPNTEDWKIQLKNQTAQGQWEDVVVVGE
ENFTTPCYIQLDAEACHILTENLSTYALVGRSTTKAAAKRLKLAIFGPLCCSSLEYSIRV
YCLDDTQDALKEVLQLERQMGGQLLEEPKTLHFKGSTHNLRLSIHDVAHSLWKSKLLAKY
QEIPFYHIWSGSQRNLHCTFTLERFSLNTVELVCKLCVRQVEGEGQIFQLNCTVAEEPTG
IDLPLLDPASTITTVTGPSAFSIPLPIRQKLCSSLDAPQTRGHDWRMLAHKLNLDRYLNY
FATKSSPTGVILDLWEAQNFPDGNLSTLAAVLEEMGRHETVVSLAAEGQY
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaggtctgcgggcgacagcggcccgctgcggactgggactaggatacgtgctg
caaatgctggtgctacctgccctggccctgctcagcgccagcggcaccggctcggccgct
caagacgacgacttttttcatgaactcccagaaacgtttccatctgatccacctgagcct
ctgccacatttcctcattgagccagaagaagcttatattgtgaagaataagcctgtgaac
ctgtattgcaaggccagccctgccacccagatctacttcaagtgcaatagtgagtgggtt
caccagaaggatcacatagtagacgagagagtggacgaaacctctggtctcatcgtccgg
gaagtgagcattgagatttcacgacagcaagtggaagaactctttgggcctgaagactac
tggtgccagtgtgtggcctggagctcagcgggcaccacgaagagtcggaaggcttatgtg
cgcatcgcatatctgcggaagacatttgagcaggaacccctgggaaaggaagtgtccctg
gaacaggaagtcttactccaatgtcgaccacctgaggggatcccagtggctgaggtggaa
tggttgaaaaatgaagacataattgatcccgttgaagatcggaatttttatattactatc
gatcacaacctcatcataaagcaggcccgtctctcagatactgcaaattatacctgtgtc
gccaaaaacattgttgccaagaggaaaagcacaaccgccactgtcatagtctatgttaat
ggtggctggtctacctggacagagtggtctgtgtgtaatagccgctgtggacgagggtat
cagaaacgcacaaggacctgtaccaacccagcaccactcaatggcggtgccttctgtgag
gggcaaagtgtgcagaaaatagcttgtactacattgtgcccagtggatggcagatggacc
tcatggagcaagtggtctacttgtgggactgaatgcacccactggcgcaggagggagtgc
acagcaccagcccccaagaatgggggcaaggactgcgatggcctggtcttgcaatccaag
aactgcacggatgggctttgcatgcagagtttcatttatcctatttcaactgaacagaga
acccagaatgaatatggattttcttctgctcctgattcggatgatgtcgctctctacgtt
gggattgtcatcgcggtgattgtttgcctggcaatctctgttgtggtcgccctgttcgtg
tatcggaagaaccatcgtgactttgagtctgatatcatcgactcttcagcactcaatggg
ggctttcagcccgtgaacatcaaggcagccagacaagatcttctggcggtgcccccagac
ctcacttcagctgcagccatgtacaggggaccagtctacgccctgcatgatgtctcagac
aaaatcccaatgaccaattctccaattctggatccactgcccaacctgaaaatcaaagtg
tacaacacctcaggtgctgtcactccccaagatgacctctctgagtttacatccaagctg
tccccccagatgacccagtccttactggagaacgaggccctcaacctgaagaatcagagt
ctcgccaggcagactgatccatcttgtacagcgtttggcaccttcaactcccttgggggt
cacctgattgtccccaattcaggagtaagcttgctgattcccgctggggccattccccaa
ggaagagtctatgaaatgtatgtgactgtacacaggaaagaaaatatgaggccacccatg
gaagactctcagacgctcttgacccctgtggtgagctgtgggcccccaggagctctgctg
acccgccctgtcatcctgactctgcatcactgtgcagatcccaatacggaggactggaag
atccagctcaaaaaccagacagcacagggacagtgggaggatgtagtggtggttggagag
gaaaacttcaccaccccctgctacattcagctggacgcagaggcctgccacatcctcaca
gagaacctcagtacctatgccctggttgggcgatccaccaccaaagctgcagcaaagcgc
ctgaagttagccatctttgggcccctctgctgttcctccctggagtacagcatccgggtc
tactgtttggatgacacccaagatgccctgaaggaagttttacaacttgagagacagatg
ggaggacagctcctggaggaacctaagacccttcattttaaaggcagcacccataatttg
cgcctgtccattcatgacgttgcccattccctctggaagagcaaattgctggctaaatat
caggaaattcctttttaccatatctggagtgggtctcaaagaaacctccactgcaccttc
actctggaaagatttagcttgaacacggtggagctggtctgcaaactctgtgtacgacag
gtggaaggagaaggacagatcttccagctaaactgcacggtagcagaggaacctacaggc
atagatttgcccttgctggatcctgccagcaccatcaccactgtcacaggaccgagtgct
ttcagcatccctctccccatccgacagaagctctgcagcagcctggatgccccacagaca
aggggccatgactggaggatgctggcccataagctaaatctggacaggtacttgaattac
tttgccaccaaatcaagccccactggtgtaatcctggatctctgggaggcacagaacttc
ccagatggaaacctgagcacgctggcagctgttttggaagaaatgggaagacatgaaaca
gtagtgtctttagcagcagaagggcagtattga
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