Sciurus carolinensis (gray squirrel): 124994859
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Entry
124994859 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124994859
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124994859
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124994859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_4
zf-rbx1
zf-UDP
zf-C3HC4_4
zf_RING_Vps8
Rtf2
TerY_C
zf-RING_11
zf-RING_16
TRAF3_RING
IBR_1
DZR
zf-RING_10
zf-RING_6
FAM216B
zf-P11
zf-RING_Vps41
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124994859
NCBI-ProteinID:
XP_047423091
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All DBs
Position
10:complement(139180664..139210471)
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AA seq
190 aa
AA seq
DB search
MSTRKRRGGTVSSRQAQKRTREAASTPEISLEAEPIELVETAGDEIVDLTCESLEPVVVD
LTHNDSVVIVDERRRPRRNARRLRQDHADSCVVSSDDEELSRDRDVYVTTHTPRNARDEG
ATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI
NHKRYHPIYI
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagaaagcgccgtggtggaacagtaagttctagacaagcccagaagcgaact
cgggaagcagcctccacccctgagatttccttggaagcagaacccatagaacttgtggaa
actgctggagatgaaatcgtggacctcacctgtgaatctttagagcccgtcgtcgtggac
ctgactcacaatgactctgttgtgattgttgacgaaaggaggaggccaaggaggaacgcc
aggaggctgcgccaagaccatgctgacagctgcgtagtgagcagtgatgacgaggagttg
tccagggacagagatgtgtatgtgaccacccacactcccagaaacgccagggacgagggg
gccacaggactcaggccctctggtactgtcagttgtcccatctgcatggacggatactca
gagattgtgcagaatggacgtctcattgtctctacagagtgtggccacgtcttctgtagc
cagtgcctccgtgattcccttaagaatgctaacacttgcccaacttgtaggaaaaagatc
aaccacaaacgataccaccccatttatatatga
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