Sciurus carolinensis (gray squirrel): 124994861
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Entry
124994861 CDS
T08117
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124994861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124994861
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124994861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
124994861
NCBI-ProteinID:
XP_047423094
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All DBs
Position
10:complement(46950672..47037101)
Genome browser
AA seq
1261 aa
AA seq
DB search
MSAPAGSPHPAASARIPPKFGGAAASGAAAPAGPSPAPHQQNGPAHSQMQVPSGYGLHHP
NYIAPSGHFSQGPGKMTSLPLESQHDDYYSGLYAVPTQNVVTPSTANQSGVQQMYGRGPP
APHVVGSTPGSFQGAASSASHLYTSASQPYSSFVNHYNSPALYSANSSVASQGFPSTCGH
YAMSTVSNAVYPNVSYPSLPADDPYGQIFTSQNAPTVRPVKDNSFPGQNTVISHPSPLPP
PPSQQHQQQQSLSGYSTLSWSAPGLPPTQDSLVRNHTGSLAPTNNNPTNTVADSLSCAVM
QNVQPRKSSPVVSTVLSGASSTRMPPAAKHPGEPVTPVTQPSELLQHKGMQYGEYVNNQA
SSAPTPLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDVHSSSASSP
APDPAPEPDPVPAPAPVPAPAAPQPSKMAKPFGYGYPILQPGYQNATAPLNSGVHPSSQG
YSGYQQYPQQYPGVNQLSSGLGGLSLQSSPQPESLRPINLTQERNVLPMTPVWAPVPNLN
LELKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS
CRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIAS
SDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTI
HFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETH
SALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDF
YKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHHTHNPSQAEKLQ
KDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIE
ESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAV
DRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALIAPGSLKLFPLYVLALLKQKAF
RTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAIHVNDRVVPQPPLQK
LSAEKLTREGAFLMDCGSVFYIWIGKGCDNNFIEDVLGYPNFASIPQKMTHLPELDTLSS
ERARSFITWLRDGRPQSPILHVVKDESPAKTEFFQHLIEDRTEAAFSYYEFLLHVQQQIC
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccccgccgggtcccctcacccggccgccagtgcccggatcccgcctaagttc
ggcggagccgccgcctcgggagccgccgcacccgcgggccccagcccggcgccgcaccag
cagaacggtccagcacacagtcaaatgcaggttccatctggatatggattgcatcatcca
aactatattgccccctcaggacatttctctcaaggacctggaaaaatgacctcattgcca
ttggagagccagcatgatgattactattctggtctctatgcagtaccaacacaaaatgtg
gtgactcctagcacagcaaaccaatcaggagtacagcagatgtatggcaggggtcctcct
gcccctcacgttgtgggatccactccaggatctttccaaggtgctgcatcatcagcatcc
catttgtatacgagtgcctcccagccatattcctcttttgtgaatcactacaatagtcca
gccttgtactctgccaactcttctgttgcttctcagggatttccctctacttgtggtcat
tatgctatgtcaactgtttctaatgctgtgtatcctaatgtttcatatccttctctgcct
gctgatgatccatatgggcaaatttttacctcacaaaatgctccgactgtcagaccagtt
aaagataattcatttcctggccaaaatacagttatcagccacccatcacctcttccacct
ccaccatcacaacagcaccagcagcagcaaagtctttcaggatacagtactctatcatgg
tcagctccgggccttccaccaacccaagacagtctcgtccgaaaccacacggggtccctg
gctccaaccaacaacaacccaacaaatactgttgcagattctctatcctgtgctgtcatg
cagaatgtccagcctcgaaagtccagcccagtagtatccactgttttgtctggagcctca
tcaacaagaatgcctcctgctgcaaagcacccaggggaacctgtgaccccagttacgcag
ccatcagagctattacagcacaaaggcatgcagtatggtgaatatgttaataatcaagct
agctccgcaccaactcccttgtcatcaacttccgatgatgaggaagaggaggaggaggat
gaggaagcaggtgttgacagctcttctaccacaagcagtgcttctccaatgcccaacagt
tacgatgccctggaaggaggcagctacccagatgtgcattcttcctcggcaagcagccct
gctcctgatccagcccccgagcctgatcctgttccagctccagctccagtgccagctcct
gctgctcctcagccttcaaaaatggctaagccttttggctatggttatccaattcttcag
cctggttatcagaatgctacagcaccacttaattctggagtacatcctagtagccaaggg
tattctggatatcagcagtatcctcagcagtatcctggtgtcaaccaactgtcctctggt
ctaggaggattgagtcttcagagttctccacaaccagaaagcctgagacctataaacctc
actcaggagaggaatgttttacccatgactcctgtttgggctcccgtgcctaacttgaac
ttagaactcaaaaagctaaactgtagcccagattcttttcggtgtactttgacaaatatt
ccacagactcaggctttattgaataaagctaagcttcctttaggattgttgttacatccc
ttcagagacctaacgcaattaccagtgataacatcaaataccattgtgaggtgccgatct
tgtcgaacatacatcaacccttttgtatccttcatcgatcaacgtagatggaaatgcaat
ttgtgctatagagttaatgatgttcctgaagaatttatgtataaccctctcactcggtct
tatggagaacctcataaacgaccagaagttcagaattcaactgtggagtttattgcttct
tcagattacatgcttcgtcctcctcaacctgcagtttacttgtttgttttagatgtatct
cataatgcagtggaagcaggatatttgacaattttgtgccagtcactgttagaaaactta
gacaagcttcctggagattcacgaacaagaataggattcatgacctttgacagtactatt
catttctacaatttacaggaaggattatcacagcctcagatgttgattgtatctgatatt
gatgatgtttttctgcctactccggatagtttacttgtgaatctctatgaaagtaaagag
cttataaaagacttattgaatgcattaccaaatatgttcaccaacacaagagaaacacac
agtgcccttggtcctgcgcttcaggctgcctttaaattaatgtctccaacaggtggccgt
gtgtctgtatttcagacacagttaccttccttgggtgcagggcttctgcagtccagagaa
gatcctaatcaaaggtccagtacaaaggtggtacaacatcttggccctgcaactgatttt
tataagaaacttgctttagattgctcaggacagcaaactgcagtggatttgttcctttta
agttcacaatattctgatcttgcttctctagcttgtatgtccaagtattctgcagggtgc
atctattattatccatctttccaccatactcacaatccttcacaagcagaaaagttacaa
aaagacctaaaacgatatctcacaagaaaaattggatttgaagccgttatgagaataagg
tgtactaaaggtctttcaatgcatactttccatggaaacttctttgtccgttccactgat
ttgttatcccttgccaatatcaatcctgatgctggatttgcagtgcaattgtcaattgaa
gaaagtttgacagatacttccttagtgtgctttcaaacagccctgttatatacatcaagc
aaaggtgaacgcagaattagagtgcatacactttgtttacctgtggtaagttcgctagca
gatgtatatgcaggagtagatgtacaagctgccatctgtctcctggcaaacatggctgtg
gatcgatcagtttcatcaagtctgtcagatgcaagagatgccttagtgaatgctgtagtg
gattcactgtctgcctatggctccactgtctcaaatttgcagcactctgcattgatagca
cccggctccctcaagttgtttcctctctatgttttagcccttctcaaacagaaagcattt
agaacgggtacaagcactcgcctggatgatcgtgtgtatgccatgtgtcagataaagtct
cagccactagttcatctaatgaaaatgattcatcccaatttatataggatagacagattg
acagatgagggtgccatacatgttaatgacagggtggtaccacagccaccgcttcaaaaa
ttgtctgcagagaagcttacaagagaaggtgctttccttatggactgtggctctgttttt
tacatttggattggaaaaggctgtgacaataacttcatagaggatgtgcttggttatcct
aattttgcatcaataccacagaaaatgacgcatcttccagagctagacacactttcatca
gaacgagccagatcctttataacttggcttagagatggcagaccgcaaagtccgatcctt
catgtggtaaaagatgagagtcctgccaaaacagaattttttcaacatttgattgaagac
cggacagaagctgcattttcttactatgaatttttgcttcatgtacagcagcaaatatgt
aagtga
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