Sciurus carolinensis (gray squirrel): 124994864
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Entry
124994864 CDS
T08117
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124994864
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124994864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_1
TPR_1
TPR_7
SH3_2
TPR_NPHP3
SH3_9
Csd3_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
124994864
NCBI-ProteinID:
XP_047423099
LinkDB
All DBs
Position
10:137611601..137645224
Genome browser
AA seq
1410 aa
AA seq
DB search
MINRGQRLRLPLLTGPRPWRKWGRKQGRWRLLAVSLLWVASACPGQLWTALWAASSKQSR
DRPPASLAGGLRGVCGAELRPAGHAGPSALGLGLVMKSPKEETTGQPTEMGWGPAGPSGG
CGSGRKVQSEAVSSPCSREPAGPQEAPATARGDLALQLRAVRRKSGLPDPCLQQALRGRL
RLLENESQEVAHVLGDLSARLLSIHSDQDRIMVTFKTFEEIWKFSTYHTLGFTHHCLENL
LVDQAFWLLSPGEEEETAIRVHVEEGALKLTYQSLLAQEGPFFVLCPDHHVKLTPGPWSM
GKGPRVLRKASGGPLEDMALEVDSPTTSEETAAAVTLEPLIPFHQWVLKVPWDPIDDSVG
GPVTPEVSQMGLGLASALADFQGSGPEEMSFHAGDLIEILGAQVPSLPWCVGRHVVSGQV
GFVRTSLISVQGPVSELDRVVFLDQEERAFFSNEGHFSEDDARRLLGRMAGTAVCCVHSL
DHLEEAECARPEEPERPPPDLTPDSRETLWMVKDVLEQCKTLPGCPKEEPESGGLQEASS
SVRSPDTEEPPLCLDAEDGGAHPEALGSLLQFLSAPGYQACYRGLYDASLPWLGSVFRSF
ADEEELAGLLARAREMAKKAGLGAALARLCFLLARLCARKLKLSQARVYFEEALRALGGS
FEDLFLVVAVYANLATIYLKQKSREKCAQVVPKAAALLLGTPSHPCSSEVEVELLKYALR
RAVGAGSLQAEARACFLLAKHHTRLRQPEAALPYLERLLLLHRDLGSPLASWPVNGYLLL
ADTYSRKCLPHLALSCVRVASLHTPGSLASSLRSVDLVLWNAPRLHGQRRAAHSLPAQTA
HYLRQALASTAAGTGRALRGPLYASLAQLHSYHGQHGQAIAFMMRAVQADSLAGLRPVVD
RLVVLAWLHTLHGQSLVALDILQAILDADVASEDQEGVIANMAAIALRRTGRTRQAAESY
YRALRLARGLGQLQNQAVVLANFGALCLQASATGLARHYLLEAIRLFSQLPVSECGRDFT
QVLLWMGHLYARRALAQQGKCYYQWALLVAVETDHLESQLQAVQQLCHFYSSVMPNEAQN
VIYHEFQLTLARRVADKGLEGQLLEAISQLYLSLGTERAYRSALDYTKRSLGIFIDLQQK
EKEAHAWLQAGKIYYILHQDELVDLYIQVAQNAALCTGDPNLGLELFEAAGDIFFNGTWE
REKAVSFYRDRALPLAVTVGNREAKLRLCNKLAALLATLESSREGLEFAHEALALSIALG
DRLNERVAYHRLATLHHRLGHGELAEHFYLKALSLCSWPLEFQEETLYYLKVYLALGHIL
FCDLKDPFDAAGYYQLALAAAVDLGHKKAQLKICTRLATIYHHFLMDREMSLFFYQKART
FASELNLRRTNLVPQRFCGRAPWLAPGHLP
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatcgcggccagcggctgcgcctgcctctcctcactggccccaggccctggagg
aagtggggcaggaagcaggggcggtggcggctgctcgcagtcagtctgctgtgggtggcc
tctgcctgccccggccagctgtggacagccttgtgggccgccagcagtaagcagagccgg
gacaggccccctgcgtccttggctggtgggctgagaggtgtctgtggagcagagctcagg
ccggctgggcatgctgggccctcagcgctggggctggggctggtcatgaaaagccccaag
gaggagaccactgggcagccaaccgagatgggctgggggcctgcagggccctctggaggc
tgtggcagcgggcgcaaggtccagagtgaggccgtgagctcaccctgcagccgagagcca
gccgggcctcaggaggcccctgcgacggcgagaggcgacctggccttgcagctgcgggcc
gtgcggaggaagagcgggctgccagacccctgccttcagcaggccctgcggggccggctg
cgtctgctggagaacgagagccaggaggtggcccacgtgctgggggacttgtcagccagg
ctgctgtccatccacagtgaccaggaccggatcatggtgacgtttaagacttttgaagaa
atctggaagttctccacctaccacacccttggtttcactcatcactgcttggaaaacctg
ctggtggaccaggccttctggctgctctcgcccggcgaggaggaggagacggccatccgg
gtgcacgtggaggagggggccttgaagctgacgtaccagagcctgctggcccaggaaggg
cctttcttcgtcctgtgtcccgaccaccatgtgaaactgacacctggcccgtggagtatg
gggaagggcccccgggttctcaggaaggcttcggggggccccctggaggatatggctctg
gaagtggactcgcccaccacatctgaggagacggcagctgcggtcacccttgaacccctg
attccattccatcagtgggtccttaaggtcccctgggaccccatcgatgactccgtgggt
ggacctgtgacacctgaagtttcacagatggggcttggcctggcctcggcgctggccgac
ttccagggctcggggcctgaagagatgtccttccatgctggcgacctcatcgagatcctg
ggtgcccaggtgcccagcctgccctggtgtgtgggccggcacgtggtctcaggccaggtg
ggcttcgtgaggaccagcctcatcagcgtgcagggcccagtgtctgagttggaccgcgtg
gtcttcctcgaccaggaagaaagggcgttcttcagcaacgaggggcacttttcggaggat
gacgccaggcggttgctgggcaggatggcgggcaccgcggtctgctgcgtgcacagtctg
gaccacctggaagaagcagagtgtgcgcggcctgaggagccagaaaggcctccacctgac
ctcaccccagactcccgagagaccctgtggatggtaaaggatgttctagaacaatgcaag
accctcccaggctgccccaaggaggagcccgagtccggtggtctccaggaggcttccagc
agtgtgcgctccccagacactgaggagccacccctctgcctggatgccgaggacggtggg
gcccacccagaggccctgggctcgctgctgcagttcctgagcgcccctgggtaccaggcc
tgctaccgcggcctgtatgacgcctcgctgccgtggctgggcagcgtgttccgcagcttc
gctgatgaggaggagctggctgggctcctggcacgggcccgggaaatggccaagaaagct
ggcctcggcgcggcactggccagactctgcttcctgctggcacggctgtgtgcccggaag
ctgaagctctcccaggcccgcgtgtactttgaggaagccctgagggccctggggggcagc
tttgaggacctcttcctggtggtggccgtgtatgcaaacctggccaccatctacctgaag
cagaagtccagggagaagtgtgcacaggtggtgcccaaagccgcagccctgctcctgggc
acacccagccacccctgcagttccgaggtggaggtggagctcctgaagtatgcgctgcgg
agggccgttggtgcgggcagcctgcaggccgaggcccgggcctgcttcctgctggccaag
caccacacccgcctcaggcagccggaggcagccctgccctacctggagaggctgctgctg
ctgcacagggacctgggctccccgctcgcctcctggcctgtgaacggctacctgctcctg
gcggacacctacagccggaagtgcctgccccacctggcactgagctgcgtcagggtggcc
tcgctgcacaccccgggctcgctggccagctccctgaggagcgtggacctggtcctctgg
aacgcaccccggttgcacggccagaggagggcggctcacagcctccctgcccagaccgcc
cactacctcaggcaggcgctggcctccacggctgcgggcacagggcgggcccttcgaggt
cccctctacgccagcctggcccagctgcacagctaccacgggcagcatgggcaggccatt
gccttcatgatgcgggcggtgcaagccgacagcttggccggcctccgccccgtggtggac
cgcttggtggtgcttgcctggctgcacacgctccacgggcagagcctggtggccctggac
attctgcaggccatcctggatgcagatgtggccagtgaggaccaggagggtgtgattgcc
aacatggcggccatcgccctgaggaggacgggcaggacccggcaggcagctgagagctac
taccgcgccctgcgcctggcccggggcctgggccagctgcagaaccaggcggtggtcctg
gccaacttcggggccttgtgtctgcaggccagcgccaccgggttggcccggcactacctc
ctggaggccatcagactcttctcacagctgcccgtctccgagtgtggccgggacttcacc
caggtgctcctgtggatgggccacctgtacgcccgccgggccctagcccagcagggcaag
tgttactaccagtgggcccttctggtggcagtggagacggaccacctggagagccaactt
caagccgtccagcagctgtgccacttctatagcagcgtcatgcccaacgaggcccagaac
gtcatctaccacgagttccagctcacgctggcccgcagggtagccgacaaggggctggag
ggccagctcctggaggccatcagccaactctacctgtccctgggcaccgagcgggcctac
agatccgctctggactacaccaagcggagcctggggatcttcatcgacctgcagcagaag
gagaaggaggcccatgcctggctgcaggctggcaagatctactacatcctgcaccaggac
gagctggtggacctgtacatccaggtggctcagaacgctgccctgtgcacaggggacccc
aacctggggctggagctgttcgaggcagcgggagacatcttcttcaatggcacctgggag
cgggagaaggccgtgtccttctaccgggaccgggcgctgcccctggctgtcaccgtgggg
aaccgcgaggccaagctgcggctgtgcaacaagctggcggccctgctggccacactggag
tcgtcgcgggagggcctggagttcgcccacgaggccctggccctcagcatcgccctgggt
gaccggctgaacgagcgagtggcctaccaccggctggccacgctgcaccaccggctgggc
cacggcgagctggccgagcacttctacctcaaggccctgtctctctgcagctggccgctg
gagttccaggaggagacgctgtactacctgaaggtgtacctggcactcggacacatcctc
ttctgtgacctgaaggacccgttcgacgcagctggctactaccagctggcgctggcggca
gccgtggacctgggccacaagaaggcccagctgaagatctgcacgcgcctggccaccatc
taccaccacttcctcatggaccgcgagatgtccctcttcttctaccagaaggcgaggacc
ttcgcctccgagctcaacctccgcaggaccaacctggtgccccaacgcttctgcggccgg
gccccctggctggcccccggccacctgccctga
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