KEGG   Sciurus carolinensis (gray squirrel): 124994964
Entry
124994964         CDS       T08117                                 
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ncar04990]
    124994964
Domain-containing proteins not elsewhere classified [BR:ncar04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   124994964
SSDB
Motif
Pfam: EIF3I WDR55 Beta-prop_NWD2_C WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 AAA_16 NPHP3_N Beta-prop_WDR90_POC16_2nd NACHT AAA_22 AAA DUF4062 NPHP3 AAA_28 B-prop_COPA_B_2nd Beta-prop_RSE1_2nd PQQ_2
Other DBs
NCBI-GeneID: 124994964
NCBI-ProteinID: XP_047423274
LinkDB
Position
10:complement(110590808..110756280)
AA seq 1737 aa
MWPAGAGTKLPCPRDSALRRAAFSGNLTALPSHLVPAGRSVRVFISANPEDTGAERQALR
ENVYPKLREFCRENYGLEFQVIDLYWGIEEDEWDSPELQKTRMKLLEDCLKTSAGPCFVG
LLGEKYGNIRIPGEVEASEFEMILDAAMEAKLETKLLEEWYCRDENSVPAAYYLRPKSEM
LRSNKNAMQPPVNAENEKPWQEISDEIKTILKAAVKLLHEKGKMKHSQAKRYLFSAIEDE
FDFALGKQTPAFLKKCVCYIRKIANIERFVKIPEMGKYMDITGAEPRIIRDPEAQEKLIK
LRDEFIPTIVASSNLRVYTSVTHCDMKLGYSQEIENHYIEGLGKQFYEDMIDIIQATVQQ
NFDTETDTLYDEILQHSSLCKTYASFYEYKCEALNIVHKYILPSKTGHINPLIVYGGPCT
GKTLLLAEVAKKAYGWLHEETGPESDPVVVVRFLGTTDMSTDLRTLLLSVCEQLAVNYRC
LVQSYPKKIHDLRDLFINLLNESSLQRPLVIIFDALEQLSENEEARKLWWLPAHLPRFVR
IVLSTLPNKHGILQKLRCLIHDDDNYIELIPRDRKMCSQVLKHQLLRVKRKVTSGQQIYV
NNAFSKCTLPMFVNLTFREVRHWRSHKDVDESSLCVTVHESIEQLFWSLEKKCGQKLISR
ALGYITMAKMGLSEMELEDVLALDNSVMNELNENTRPSNPLRVPYLYIARLKEGLSGYLI
ERHVKNVTLLVWANRHLQLIAQKLYLQDDSNLREMHTILADYFLGVWSGGRRKAFCLEDP
YLNGCLDLESRSLLEEEKHFMEQASFDRQAPDQPWVFQCNPLEPDIFFVNHRKMSELLHH
LTRCGKTDDLLYGIIMNFSWLYTMIKIGQFDKVLSDIELAYNYSQEKELKFLASTLRSIK
TKVIAFPGSLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPER
LPLSSSHLHVTEILPTCNPSTVLTALENGSISTWDVETRQLLRQITTAQSVILGMKLTSD
EKYLVVATTNNTLLIYDNVNSCLLSEVEIKGTKHGSGSTYINGFTLSVNHALAWLEASKD
VTVIDLLYGWPLYQFHCWYEVTCVQCSLDGVYAFCGQYLNTTTIFHLGSGEKLCTVTSEF
SGGFVKFLLILDTAQEMVMVDSEGSLSVWNTEDISNPQLTDDFDCRREDSEVVSIELSED
QSAILICKALSIELLHTGVWKVAEKFRAKHNERFVSAVLSKNGDCIIATMENTPAVFFWR
RDTGQCMASLQEISGTIVKLVKSSHHNMLLSLSTSGVLSIWDIDIITAMSNIDKTGKPIQ
SLVLPARGEIIYSLDGSDCVHKWNFSSGFIEAVFKHEGIVEHCVLTSAGDIMVTSDDKSS
QYVWHTSSGENLFRINGQRISQLLITHNDQFVVSLCEENASRVWRLATGHRVCNILTTLQ
NAFITSANTFVVGMTKSKVLAVSLWTGSITKKFCCEDGTTIVNFKLIPDCPDIIVFITSA
ETVNIWSLTDEVICRRVQLPNNFLKNLEDFEISPNGKLGIISRGDENINVLDLHSGKLRV
VHASGVIWRQRLSRDGRYLVYICFRNGEEEEENGAISSLIVMRLADGKNIGACSLYKTPT
FLALSQRHLNIIVGFDDGSIGIYTVVDRVDAALKIKIATSNSRQIFNNATQTSRPKSNSY
CFKVSVDCLWRESTEVFARDSPITVSDSSESNEATPSKKHNSCYALESRGHSYAPDN
NT seq 5214 nt   +upstreamnt  +downstreamnt
atgtggccagccggcgcgggcaccaagctgccctgtccccgcgactctgcactccggcgg
gcggctttctccggaaacctcacggccctgccttcgcacctagtgcccgcgggccgcagc
gtccgagtcttcatcagcgccaaccctgaagacacgggagcagaaagacaggcgctgaga
gaaaatgtatatcctaaactgagagaattctgcagagaaaactatggactggaatttcag
gtcatagatctgtactggggcatcgaggaggatgaatgggacagccccgagctccagaag
acacgcatgaagctgctggaggattgcttgaaaacttctgcaggtccatgttttgttgga
ctgttaggtgaaaagtatggaaacatccgaatccccggagaagtggaagcctcagaattt
gaaatgattttggatgctgccatggaggcaaagctggagaccaaactactggaagagtgg
tactgtcgggatgagaactccgtgccagcagcttattacctcagacctaaatcagaaatg
ctaaggagcaataaaaatgcaatgcagcctcctgtcaatgccgaaaatgagaagccatgg
caagagatatctgatgagatcaagacaatacttaaagctgctgtcaagctgttacatgaa
aagggtaaaatgaaacacagccaagctaagaggtacctgttctcagctatcgaggatgag
tttgactttgctctaggcaagcaaaccccagcattcctgaagaagtgtgtttgctacatt
agaaaaatcgctaacattgagcgctttgtgaaaatcccagagatgggaaaatacatggat
ataactggagcagaaccaaggattattcgtgacccagaagctcaagagaagctgataaaa
ctcagggatgaatttattcctactattgtcgcatcatctaatctgagagtatacacatct
gttactcattgtgacatgaaactgggctattcccaagaaatagaaaatcattacatagaa
ggacttggtaaacagttttatgaagacatgattgatataattcaggccacagtacagcaa
aattttgacactgaaactgatacactctatgatgaaatccttcaacattcgtcgttatgt
aaaacatatgcctccttctatgagtacaaatgtgaagctctaaacattgtgcataaatac
attcttccaagcaaaactgggcacatcaaccctcttattgtatatggtggaccatgcact
gggaaaaccctcctgttagctgaagtagcaaagaaggcttatggctggctacatgaagaa
acaggaccagaatctgacccagtagtcgtggtgagatttctgggaacgacggacatgagt
acagacctcaggaccctccttctgagtgtttgtgaacagctggcggttaactaccggtgc
ctggttcaaagctaccctaaaaagatccatgaccttcgggacttatttataaaccttttg
aatgagtcttcattgcagagaccgctggtaataatattcgatgccctagagcagctctca
gagaatgaggaggccaggaagctctggtggctcccggctcaccttccccgcttcgtgagg
atagttctctccacactgcccaacaaacacgggatcctgcagaaacttcggtgccttatc
catgatgatgacaactacatcgagctgattccccgggacaggaagatgtgcagccaggtc
ctcaaacaccagctgctgcgggtcaaaaggaaggtcacatcaggccagcagatttatgta
aacaacgcgttctccaagtgcacgctgcccatgtttgtgaacctgaccttcagggaggtg
agacattggagatcccacaaagatgtcgatgaatcctccctctgtgtcactgttcatgaa
agcatagagcagttattctggtccttggagaagaaatgtggccagaaactgatctccagg
gctctcggttacatcaccatggccaaaatgggtttgagcgaaatggaactggaagatgtg
ttagctctggacaacagtgtcatgaacgagctcaatgagaacaccaggcccagcaatccc
ctgagagtaccttatctgtacattgcaaggctcaaggagggtctcagtggatatttaata
gaaagacacgtgaagaatgtcaccctcctggtctgggctaacagacacctgcaactcata
gcccagaaactctatctgcaggatgacagcaacctgcgtgaaatgcacaccatcttggct
gattattttctgggggtctggtcagggggcaggaggaaagctttctgccttgaagacccc
tatttgaatggctgccttgacttggaaagcagaagcctgctggaggaagaaaagcacttc
atggaacaggcttcctttgacaggcaggcccctgatcagccctgggttttccagtgcaat
ccactggagcccgacatctttttcgtcaatcaccggaaaatgtctgagctgttgcaccac
ctgacaaggtgtggaaaaactgatgatctgctttatggcatcatcatgaacttcagctgg
ctttacactatgatcaaaattggccagtttgacaaagtgctttcagacatcgagctggct
tacaactactcccaagagaaggagctgaagttcttggccagcaccctccgcagcatcaaa
accaaggttattgcatttcctggctccctttcagcagagcttcaacagagacttctgcct
gtcgtaagctccctgcccaaacttagacaccttcttttagaatgtgacaaggacgggccc
aaatactgctccatcgtgccattgcattcatccatggatgtgacatacagccccgagcgt
cttcccctatcatccagtcacctgcatgtcacggagattctgcctacctgcaaccccagc
actgtcctcacagctctagaaaatggttccatcagcacatgggatgtagaaactcgccag
ctactcaggcaaatcaccacagcccagtccgtcatcctgggcatgaagctcaccagtgat
gaaaagtaccttgtggtggctacaacaaataacaccttgttgatttatgacaatgtcaat
tcttgtctcctgtctgaagtggaaatcaaagggaccaagcatggaagtggctccacctac
atcaatggattcacactgtctgtcaaccatgcccttgcctggctcgaagccagcaaggat
gtcaccgtcatcgatttgctctatggatggcccctttaccagttccactgctggtatgag
gtgacctgtgtccagtgctccctggatggggtatatgctttctgtgggcagtacctgaac
actactaccatatttcatttagggagtggagaaaaactttgtacggtgacatctgagttt
tcaggtggatttgtgaagtttcttcttatcttggacacagcccaagagatggttatggtg
gacagtgagggaagtctttccgtttggaatactgaggatatttccaacccccaactgacc
gatgactttgactgccgaagagaagacagcgaagtggtcagcattgaactttcagaggac
caaagtgcaattctgatctgcaaagctctcagcattgagctcttacataccggtgtgtgg
aaggtggctgaaaagttcagagccaagcacaacgaacgctttgtatcggctgtgctgtcc
aaaaatggagactgtatcatcgcgaccatggagaatactcctgctgtgtttttttggagg
cgggataccggacaatgcatggcgagcttacaggaaatctcaggtaccatagttaagttg
gtgaaatctagtcatcacaacatgctactgtctttatccaccagtggtgttctttccatt
tgggatatagacataattacagctatgtccaacatagataagactgggaaacctatccaa
agtctggtgttgcctgctagaggggaaatcatttactccctggacggctctgattgtgtt
cataagtggaacttcagcagtgggttcattgaagcggtatttaagcatgaaggcatagtg
gaacactgtgtgttaacatccgctggtgacataatggtgacatcagatgacaaaagcagc
cagtatgtctggcacaccagcagtggggaaaacctcttccgaattaatgggcagagaatc
tctcagctgctgatcacacacaatgaccagtttgtggtctccctctgtgaggagaatgcc
tccagggtttggagactggccacaggccacagggtctgcaacattctcaccactttgcaa
aacgcctttattacctccgcaaataccttcgtggtgggaatgactaaaagcaaagtgttg
gcagtcagcctgtggacaggaagtatcaccaagaagttttgctgcgaagatggaaccacc
attgtgaattttaaactgatccccgactgtccagacatcatcgtgttcatcacatcagcg
gagacggtgaacatctggagtctgacagatgaagtgatctgtcgccgcgtccagcttcca
aacaacttcttgaaaaatctggaggactttgaaatttctcccaatggaaagttaggcatt
atatctaggggagatgaaaatatcaacgtgctggatttacacagtggtaaattacgggta
gttcatgcctccggggtcatctggcgtcagaggctgtctcgggatggtcgctacctggtc
tacatttgcttccgaaacggggaagaagaggaagaaaacggtgcaatatccagcttaatt
gtaatgagactggctgatggcaaaaatatcggtgcttgttccctttacaaaacgccaact
ttcctggcactctctcagaggcacctgaacatcatcgtgggttttgatgatgggagtatc
gggatatacactgtagtggaccgtgtagacgctgcactgaaaatcaaaatcgccacttcc
aatagcaggcagattttcaacaatgcaacccagacatccaggccaaagtctaacagttac
tgttttaaagtatctgtggattgcttatggagagagtccactgaggtctttgcaagagac
agtcccatcacagtcagtgactcctcagagtccaatgaagcgacaccctccaagaagcac
aactcttgctatgccctagaatccaggggtcacagctatgcccctgataactga

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