Sciurus carolinensis (gray squirrel): 124995075
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Entry
124995075 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04723
Retrograde endocannabinoid signaling
ncar04727
GABAergic synapse
ncar04742
Taste transduction
ncar05032
Morphine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124995075
04082 Neuroactive ligand signaling
124995075
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124995075
04723 Retrograde endocannabinoid signaling
124995075
09157 Sensory system
04742 Taste transduction
124995075
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
124995075
05033 Nicotine addiction
124995075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124995075
Ion channels [BR:
ncar04040
]
Ligand-gated channels
GABA-A
124995075
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124995075
NCBI-ProteinID:
XP_047423474
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Position
10:102963433..103103589
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AA seq
511 aa
AA seq
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MKAKLDIYNMQSLLLVFLVWDPARLVLANIQEDEAKNNITIFTRILDRXLDGYDNRLRPG
LGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSC
PLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKSPSIKAE
GIILTYNSVKAILQGAKLIWSKYVAFSWPNLIQGKTLEYLEKWMDCLTFKQSSKKEKASV
MIQNNAYAVAVANYAPNLSKDPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDRM
SRIVFPVLFGTFNLVYWATYLNREPVLGVSP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaattggacatctacaacatgcagtccctgctgcttgttttcttggtgtgg
gacccagccaggttggtgctggctaacatccaagaagatgaggctaaaaataacattacc
atctttacgagaattctagacaganctctggatggttacgataatcggcttagaccagga
ttgggagacagtattactgaagtcttcactaacatctacgtgaccagttttggccctgtc
tcagatacagatatggaatatacaatagatgttttctttcggcaaaaatggaaagatgaa
cgtttgaaatttaaaggacctatgaatatccttcgacttaacaatttaatggctagcaaa
atctggactccagataccttctttcacaatggcaaaaagtcagtagctcataatatgaca
atgccaaataaactgcttcgaatccaggatgacgggactctactgtacacaatgaggctt
acagttcaagctgaatgtccaatgcacttggaggattttccaatggatgctcattcatgt
cctctgaaatttggcagctatgcatatacaacctcagaggtcacttatatttggacttac
aatgcatctgactcagtacaggttgctcctgatggctccaggttaaatcaatatgatctg
ctgggccaatcaattggaaaggagacaattaaatccagtacaggtgaatatactgtaatg
acagctcatttccacttgaaaagaaaaattgggtattttgtgattcagacctatttgcct
tgcatcatgactgtcattctctcccaagtgtcattctggcttaacagagaatctgtgcct
gcaagaactgtgtttggagtcacaactgttctgacaatgacaactctaagcatcagtgct
cgaaattctctccccaaagtggcttatgctactgccatggactggtttattgctgtttgt
tatgcctttgtgttctctgccctaattgaatttgcaactgttaattatttcaccaaaaga
ggatgggcttgggatggaaaaagtgtagtaaatgacaagtccccttcaataaaagctgaa
ggcattatattaacatacaactcagtgaaggcaattcttcaaggcgctaaactaatctgg
tccaagtatgtagctttctcatggcccaatttaatccaaggaaaaactttagagtactta
gagaagtggatggactgtttaaccttcaaacaatcttctaaaaaagagaaagcctctgtc
atgatacagaacaatgcttatgcggtggctgttgccaattatgccccgaatctttcaaaa
gatccagtactctccaccatctccaagagcgcaaccacgccagaacccaacaagaagccg
gaaaacaagccagcggaagccaagaaaaccttcaatagtgttagcaaaattgacagaatg
tccagaatagttttcccagttttgtttggtacatttaatttagtttactgggccacgtat
ttaaacagggaacctgtgttaggggtcagtccttga
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