Sciurus carolinensis (gray squirrel): 124995083
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Entry
124995083 CDS
T08117
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04723
Retrograde endocannabinoid signaling
ncar04727
GABAergic synapse
ncar04742
Taste transduction
ncar05032
Morphine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124995083
04082 Neuroactive ligand signaling
124995083
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124995083
04723 Retrograde endocannabinoid signaling
124995083
09157 Sensory system
04742 Taste transduction
124995083
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
124995083
05033 Nicotine addiction
124995083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124995083
Ion channels [BR:
ncar04040
]
Ligand-gated channels
GABA-A
124995083
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
124995083
NCBI-ProteinID:
XP_047423486
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Position
10:102415599..102481608
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AA seq
555 aa
AA seq
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MVSAKKVPAIVLSSGFSFALLHFLCLAACLNESPGQNQKEEKLCPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKTSKPLA
EIPPAPVPREKHPEVPLQNTNASLNMRKRTNALVHSESDVGNRTEVGNHPSKSAPGVQES
SEATSKSYLASSPNPFSRANAAETISAARALPSGPSSTPSRTGCVLRQTSVGSASTRRVF
GSRLERIKPTVNTTGASGKSSASPPPPAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWV
VYLSKDTMEKSESLM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggtacccgcgatcgtgctgtcctccgggttcagtttcgccctc
ctgcacttcctgtgcctggcggcttgtttaaacgaatccccaggacagaaccaaaaggag
gagaaattgtgcccggaaaattttacccgcatcctggacagtttgctcgatggttatgac
aacaggctacgtcctggatttgggggtcctgttacagaagtgaaaactgacatatatgtc
accagctttggacctgtttctgatgttgaaatggagtacacaatggatgtgttcttcagg
cagacatggattgacaaaagactaaagtatgatggtcccattgaaattctgaggttgaac
aatatgatggtaacaaaagtatggacccctgatactttcttcaggaatggaaagaaatct
gtctcacataatatgacagctccaaataagctttttagaattatgagaaatggcactatt
ttatatacaatgagactcaccataagtgcagagtgccccatgagattggtggattttccc
atggatggccatgcttgcccactaaaattcgggagttatgcatatccaaagagtgagatg
atctacacatggacaaagggtcctgagaaatcagtggaagtgccaaaggagtcttccagc
ttagttcagtatgacctgattgggcaaactgtatcaagtgagactatcaaatccattaca
ggtgaatacattgtcatgacagtttacttccacctaagacggaagatgggatattttatg
attcagacttacattccatgcataatgacagtgattctttctcaagtttcgttctggata
aataaggaatcagttccagcgaggactgtatttggaataaccacggtcctcactatgacc
acactaagcatcagtgcaaggcattctttgcccaaagtgtcctatgctactgccatggat
tggttcatagctgtctgctttgcttttgtattttcggcccttattgagtttgctgctgtc
aattatttcaccaatattcaaatgcagaaagccaaaaagaagacatctaaacctcttgca
gaaattccacctgctccagtaccaagagaaaagcatcctgaagtacctctgcagaataca
aatgccagtttgaacatgagaaaaagaacaaatgccttggtccactcggaatctgatgtt
ggcaacaggactgaggtgggaaaccatcctagcaaatctgccccaggtgttcaagaatcc
tctgaagccacatctaagtcgtacttagcttccagtccaaacccattcagccgggcaaat
gcagccgaaacaatatctgctgccagagcgcttccatccggtccttcttctactcctagt
cgaactgggtgtgtgttgagacaaacttcagttggatctgcttctactcgtcgagtattt
gggtcaagactggagcggattaagcctacagttaacaccacaggggcttctgggaagtcg
tctgcctctcctcctcctcctgctcctccaccttctggatctggcacaagtaaaatagac
aaatatgcccgtattctctttccagtcacatttggggcatttaacatggtctattgggtt
gtctatttatctaaagacactatggagaaatcagaaagtctaatgtaa
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