Niveispirillum cyanobacteriorum: C0V82_04825
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Entry
C0V82_04825 CDS
T05262
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncb
Niveispirillum cyanobacteriorum
Pathway
ncb03420
Nucleotide excision repair
ncb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0V82_04825
03430 Mismatch repair
C0V82_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncb03400
]
C0V82_04825
Enzymes [BR:
ncb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0V82_04825
DNA repair and recombination proteins [BR:
ncb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0V82_04825
MMR (mismatch excision repair)
Other MMR factors
C0V82_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
DUF3553
CarD_TRCF_RID
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUN29624
UniProt:
A0A2K9N955
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All DBs
Position
eg_1:complement(1079198..1081522)
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AA seq
774 aa
AA seq
DB search
MIDDLIDEPFPAHPPAPAHRPYLDGLNPVQRQAVEALDGPVLVLAGAGTGKTRVLTTRLA
HLLLSRRISPWNVLTVTFTNKAAREMRDRVDNLLGSQSEGWWMGTFHSLAARILRRHAEL
IGLKPSFTILDTDDQIRLVKQLMEAENIDAKKWPARMLLSIIERWKDRALTPDKLKPEDA
GDAANGRILSIYKQYQDRLLSLNCCDFGDLLLHNITLFQQHNDVLIEYQRRFKYILVDEY
QDTNVAQYLWLRLLAQSHKNICCVGDDDQSIYGWRGAEVGNILRFEHDFPGAQVIRLEQN
YRSTAHILGAAHGIIANNQGRLGKQLWTETEGGEKVRVRGLWDAEEEARWVGDEVEALQR
QRVSLGQMAVLVRAGFQTREFEERFITLGLPYRVIGGPRFYERQEIRDALAYLRVLVSPE
DDLAFERIINTPKRGIGATTIQSLYVAARTLGVPLTEAAWKLSQTDELKPKMRSAISGLS
QDFFRWRALIDRVPHTELAQTILDESGYTRMWQEDKSPEAPGRLDNLKELINAMGEFENL
TGFLEHVSLVMENAQGSGDEQVSLMTLHGAKGLEFDVVFLPGWEEGVFPSQRTLDENGIA
GLEEERRLAYVGITRGRKRVYISHAANRRIHGTWATAIPSRFVEELPGEHIETENNPGIG
GAGFGGGMRESAYGGGFGGGWGGGGFGDRFNRMGQKAAQAPARNAGRLIEGTAIDVTPRP
RPDRPFNPGDRVFHTKFGYGTVKGVENDKLEISFDVAGVKKVIDRFVVPADQAG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgatctgatcgacgagccgtttccggcgcacccgcccgcccccgcgcaccgc
ccctatctggatgggttgaacccggtccagcggcaggcggttgaagcattggacgggcct
gtcctggtcctggccggggccggcacgggcaagacgcgggtgctgaccacgcggctggcg
cacctgttgctgtcgcgccggatcagcccttggaacgtgctgacagtgaccttcaccaac
aaggccgcgcgggaaatgcgcgaccgcgtcgacaacctgctgggcagccagtcggaaggc
tggtggatggggactttccattcgctggccgcccgcatcctgcgccgccatgccgaactg
atcgggctgaagcccagctttaccatcctggacaccgacgatcagatccgtctggtgaag
cagttgatggaggcggaaaatatcgacgccaagaaatggcccgcgcgcatgctgctgtcc
atcattgagcggtggaaggaccgggcactgaccccggacaagctgaagccggaggatgcc
ggcgatgccgccaatggccgcatcctgtcgatctacaagcagtatcaggaccggctgctg
tccctgaactgctgcgattttggcgatctgctgctgcacaatatcacgctgttccagcag
cataatgatgtgctgatcgagtatcagcggcggttcaaatatatcctggtagacgagtat
caggataccaacgtggcccaatatctgtggctgcgcctgctggcccagtcgcacaagaat
atttgctgcgtgggtgatgatgaccagtcgatctatggctggcgcggggcggaggtgggg
aacatcctgcgctttgagcatgatttccccggcgcccaggtcatccgtctggaacagaat
taccgctccaccgcccatattctgggggccgcccatggcattatcgccaacaaccagggg
cgcctcggcaagcagctttggaccgaaacggagggcggggagaaggtgcgcgtccgtggc
ctttgggacgcggaggaggaggcacgctgggtcggcgatgaggtggaagcgttgcagcgc
cagcgcgtcagcctgggccagatggccgtcctggtccgcgccggcttccagacccgtgag
ttcgaggaacggttcatcacgctgggcctgccataccgggtcatcggcggtccgcgcttc
tatgaacgtcaggaaatccgcgacgcgctggcctatctacgtgtgctggtgagcccggag
gatgatctggcgtttgagcgcatcatcaacacgcctaagcgtggcatcggcgccacaacc
atccagagcctgtatgtggccgcgcgtacgctgggtgtgccgctgacggaggccgcgtgg
aagctgtcgcagacggatgagttgaagcccaagatgcgtagtgccatttccggcctgtcg
caggattttttccgctggcgcgccctgatcgaccgggtgccgcatacggaactggcccag
accattctggatgaaagcggctatacccgcatgtggcaggaggataagagcccggaagcc
cccggccgcctggacaacctgaaagagttgatcaacgccatgggggagttcgagaacctg
accgggttcctggaacatgtctccctggtcatggagaacgcgcaagggtcgggcgacgag
caggtgtcgctgatgaccctgcacggcgccaagggcctagagttcgatgttgtcttcctg
ccggggtgggaggagggggtgttcccaagccagcgcaccctggatgaaaacggcattgcg
gggctggaggaggaacggcggcttgcctatgtcggtatcacgcgcgggcgcaaacgcgtc
tatatcagtcacgccgccaaccgccgcatccatggcacctgggccacggccattccgtcc
cgctttgtcgaggaattgccgggcgagcatatcgaaacggagaataatcccggtattggt
ggcgctggtttcggcggcggcatgcgggaaagcgcttatggcggtgggttcggcggcggc
tggggcgggggtggctttggcgaccgtttcaaccgcatgggccagaaggcagcgcaagcc
ccggcgcgcaatgctggtcgcctgattgaggggacagccattgacgtgacgccgcgcccg
cgtccggaccgtccctttaatccgggcgaccgggtgtttcacaccaagtttggctatggc
acggtcaagggtgttgagaatgacaagctggagatcagctttgacgtcgcgggcgtcaag
aaggtgatcgacaggtttgtggtgccagccgaccaggcgggttaa
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