Niveispirillum cyanobacteriorum: C0V82_06115
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Entry
C0V82_06115 CDS
T05262
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ncb
Niveispirillum cyanobacteriorum
Pathway
ncb03030
DNA replication
ncb03430
Mismatch repair
ncb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0V82_06115
03430 Mismatch repair
C0V82_06115
03440 Homologous recombination
C0V82_06115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncb03032
]
C0V82_06115
03400 DNA repair and recombination proteins [BR:
ncb03400
]
C0V82_06115
Enzymes [BR:
ncb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0V82_06115
DNA replication proteins [BR:
ncb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0V82_06115
DNA repair and recombination proteins [BR:
ncb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0V82_06115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUN29850
UniProt:
A0A2K9N9M5
LinkDB
All DBs
Position
eg_1:complement(1364016..1367507)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSADPGFIHLRVHSAYSLAEGAIKTKELVKLCKKHGYPAVGVTDTGNLFGALEFAMAASD
DGIQPIIGCQMWITPFGPQKKVAGRVLGPGADQLVLLVQSEQGYRNLMRLVSVAFMETET
GLLPQVSLEKMEGLTDGLICLTGGVGGGLNRLLLDGQKPHALDLMERLKTLFPGRLYIEL
MRHVEGPLAQAEDKVEADLIDLAYAHDIPLVATNDAYYADASMYEAHDVLLCIADGAYVM
QEDRRRVSPHHYFKSPQEMRDLFADIPEAVDNTVVIAKRCAYMPRKVNPILPPFASANGR
EEPDELRAQAHDGLTYRLNKYVFTSGMAADEKDKIEKEYRARLDFELETIIKMKFPGYFL
IVSDFIKWAKDNGIPVGPGRGSGAGSLVAWSLLITDLDPIRYGLLFERFLNPERVSMPDF
DIDFCQDRREEVIKYVQQKYGYDKVGQIITFGKLQARAVVRDVGRTLQMPYGQVDRICKL
IPNNPANPVTLQQALDGEPQLQEMKRGDETVDRLLTIALRLEGLYRHASTHAAGVVIGDR
PLDQLVPMYRDPRSDMPVTQFNMKYVELAGLVKFDFLGLKTLTVLKTAVDHVRDLGPELD
LLDLDMEDAKSYSILGRAESAGIFQLESSGMRDVLRRMKPNRIEDIIALVSLYRPGPMDN
IPKYIKVKFKQEEPDYMHPALQPILEETFGIMVYQEQVMQIAQVLAGYSLGGADLLRRAM
GKKIKEEMEKERAKFIAGSAEKLAVPEEQSGLIFDQVNKFAGYGFNKSHAAAYALVAYQT
AFMKANYPVEFMAATMTYDMGNTDKLNQFRQELVRLGIRLLPPDVNASEPRFRVEKLADG
SRAVRYALAAVKGVGQQAMEMVVRERATNGPFKDIFDFARRVDSSALNKRMLEKLVCAGA
FDSLNRNRQQLFAGLETVVRYAQAEAQQRESGMASLFGGSEAMKAPDLPKVPDWDPLERL
RHEFEAIGFYLSAHPLDSFGPAMNRMKVVKFSELPRLMRDAKSTRFKLAGIVVAKQERTA
KSGNRFAFVTLSDASGVYEVTLFAETLAQSREMLEAGRAVLLSVDAQKNGEEMRLTCHGV
LSLEDEVAKSAAGLRILLDDVNAVSAIKTTIGRLPPGRGKVTLAVELDALREVEIAIPGA
VSINAASRGAFKSIPGVIEVQEL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgatcccggttttatccacctgcgtgtccattccgcctattcgctggccgaa
ggggcgatcaagaccaaggaactggtgaagctgtgcaaaaagcacggctatccggccgtg
ggtgttacggatacaggcaacctgtttggcgccctggaatttgccatggcggcgtcggac
gatggcattcagcctatcatcggctgccagatgtggatcacgccgttcgggccgcagaag
aaggtggcaggccgtgtcctgggccccggtgccgatcaactggtcctgctggtgcagagc
gagcagggataccgcaacctgatgcggctggtttccgtcgccttcatggagacggagacg
ggcctgctgccgcaggtatcgctggagaagatggaggggctgaccgacgggctgatctgc
ctgacgggcggggtgggcggcggcttgaaccggttgctgctggacgggcagaagccgcat
gcgctggatctgatggaacggctgaagaccctgtttccgggccggctctatattgagttg
atgcgccatgtcgaggggccgctggcccaggctgaggataaggttgaggccgacctgatt
gatctggcctatgcccacgacatcccgctggtcgccaccaacgacgcctattatgccgac
gcctccatgtatgaggcgcacgacgtgcttctgtgcatcgccgacggcgcctacgtgatg
caggaggatcgccgccgcgtttccccgcaccattatttcaagtcaccgcaggagatgcgc
gacctgttcgccgatatcccggaagcggtcgataatacggtggtcattgccaagcgttgc
gcctacatgccgcgcaaggtcaaccccatcctgccgccttttgccagcgccaacgggcgg
gaggaaccggatgagctgcgcgcccaggcccatgatggcctgacctaccgcctgaacaag
tatgtgttcaccagtggcatggcggccgacgagaaggacaagatcgagaaggaataccgg
gcgcgccttgatttcgagctggaaaccatcatcaagatgaagttccccggctacttcctg
atcgtgtcggacttcatcaaatgggccaaggataatggcattcccgtaggcccgggccgt
gggtcgggggcaggcagcctggtcgcctggtcgctgctgattaccgaccttgatcccatc
cgttatggcctgctgttcgaacgcttcctgaacccggaacgcgtttcgatgcccgacttc
gatatcgatttctgccaggatcgccgtgaagaggtgatcaagtacgtgcagcagaaatac
gggtacgacaaggtcgggcagatcatcacctttggtaaattgcaggcccgcgcggtcgtg
cgcgacgtgggccgcaccttgcagatgccctatggtcaggtggaccgtatctgcaaactg
atccccaataacccggccaatcccgtcaccttgcagcaggcgctagacggcgaaccacag
ttgcaggagatgaagcggggagacgagacggttgaccgtctgctgaccatcgcgctgcgt
ctggaggggctgtatcgccacgcctccacccacgccgccggcgtcgtgatcggtgaccgg
ccgctggatcagctggtgcctatgtaccgcgatccgcgttccgatatgccggtcacgcag
ttcaacatgaaatatgtggaactggccggtctggtgaagttcgacttcctcggtctgaaa
acgctgacggttctgaagaccgcggtcgaccatgtccgtgatctgggaccggaactggac
ctgctggacctggatatggaggatgcgaaatcctattcgatcctgggccgggcagagagt
gccggtatctttcagctggaaagttcgggcatgcgcgacgttctgcgccgcatgaagccc
aaccggatcgaggacatcatcgcgctggtgtcgctgtaccgacccggccctatggacaat
atccccaaatacatcaaggtgaagttcaagcaggaagagccagactacatgcacccggcc
ctccagccgatcctggaggaaacctttggcatcatggtgtatcaggaacaggtgatgcag
atcgcccaggtcctggccggttactcactgggtggcgctgaccttctgcgccgtgccatg
ggtaaaaagatcaaggaggagatggagaaggagcgggccaagttcatcgctggttcggca
gagaagctggccgtgccggaggaacagtcgggcctgatctttgatcaggtgaacaagttc
gcgggctacggcttcaacaagtcgcatgccgccgcctatgctctggtcgcctatcagaca
gccttcatgaaggccaattacccggtcgagttcatggccgccaccatgacctatgatatg
ggcaataccgacaagttgaaccagttccgccaggaactggtgcggttgggcatccggctg
ctgccgccggatgtcaacgcgtcggagccgcgttttcgcgtggaaaagctggccgatggc
agccgggctgtgcgctatgccctggccgccgtgaagggcgtgggccagcaggccatggaa
atggtagtgcgggagcgggcaaccaacggccccttcaaggacattttcgatttcgctagg
cgcgtggacagttcggccctgaataagcggatgctggaaaaactggtttgcgctggcgcc
tttgacagtttgaaccgcaaccgtcagcagctttttgcaggcctggaaacggtggtccgc
tacgctcaggccgaggcgcagcagcgtgaaagcggcatggccagtctgtttggcgggtcg
gaggccatgaaggccccggacctgcccaaggtgccggactgggacccgctggaacggctg
cggcatgagtttgaggccattggcttctacctgtcggcccacccgctagacagtttcggc
cccgccatgaaccgcatgaaggtggtgaagttcagcgaattgccgcgtctgatgcgggac
gcgaaatccacccgtttcaaactggccggtattgttgttgccaaacaggaacgaacagcc
aaaagcgggaaccgttttgccttcgtaacgctgtctgacgcgtccggcgtttacgaggtg
acgctgttcgccgaaaccctggcgcagagccgggagatgctggaggcgggccgcgccgtg
ttgttgtcggtcgacgcacagaaaaatggcgaggaaatgcgactgacctgccacggtgtg
ctgtcgttggaggatgaggtcgcgaaaagtgccgccggcctgcgtatcctgctggatgac
gtgaatgccgtttcggccattaagaccaccattggccgcctgccgccgggccggggcaag
gtgacgcttgccgtggagttggacgcgctccgcgaagtggaaatcgccattccgggtgcc
gtttctatcaatgccgccagccggggggcgttcaagtccatccccggtgttatcgaagtt
caggagctttga
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