Niveispirillum cyanobacteriorum: C0V82_10035
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Entry
C0V82_10035 CDS
T05262
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ncb
Niveispirillum cyanobacteriorum
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncb03400
]
C0V82_10035 (addB)
Enzymes [BR:
ncb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0V82_10035 (addB)
DNA repair and recombination proteins [BR:
ncb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C0V82_10035 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AUN30535
UniProt:
A0A2K9NED0
LinkDB
All DBs
Position
eg_1:complement(2168077..2171100)
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AA seq
1007 aa
AA seq
DB search
MAPTPPPASVFTLAPNLPFVDALAAGLWEQAGGDALALNRFTVLLPTARAVRSLREAFLR
LSGGRPILLPRMAPLGDVDGDEVSLMMDGVTGKAGGLDLPPAIAPLRRQLLLARAIAAAG
DRFAKTRAQAARLARELAKLLDQTQTEMVGFDRLHALVPDDYAEHWQVTLSFLSIIVDQW
PAILAAEGAVDPAQERNNRLLAYAAALRAAPPAHPIIAAGSTGSIPATSELLATIARLPT
GSVVLPGLDRDCDDATWEALDDAHPQFGLKQLIDRIGVTRDQVPDWTLAAGVAPSCPPAR
TALIAEALRPAGTTEAWRDLGDLDPSALSGLTRIDAATPQEEAGIIALILRQALEMPGQT
AALVTPDRNLARRVATELRRWDIRVDDSAGRPLAQTPVGSYLRLIMDTAVQGAPIPLLSL
LKHPMAGAGWPAGQLRRQARLLETAILRGPRPPAGLEGLRHAIRFMASDAAEKRRRITNP
SIRDDLLTMVDRLDAAMGSLAAAVADGEERPLSDWLRLHIGAAEALAALEGEAGSDRLWR
DKDGEAAAQFIDELREAADGYPPLGGKDYAGLMEVLIAGKAVRSAFGLHPRLHVLGLMEA
RLQQFDVMVLAGLNEGTWPPAPPPDPWMSRPMRRDFGLPAPERMVGQAAHDFATSCGAKT
LYLTRSERVEGTPTVPSRWLLRLDTVLDKAGLRGRIEADGDYWRGLWQALDRPAQVRPCL
APAPKPPLSARPRKLSVTQIETWMRDPYAIYAAKVLDLSALDPIDADPGAAERGEIIHRA
LDLFVSHYPDMLPPDPLGELIAIGRGAFGDLLDQPGVAAFWWPRFERVAEWFVAQETERR
RTIKPLATEVTGRITLPGPGGDFILTAKADRIDRTPTGGLVLIDYKTGTPPTGKEVRLGK
APQLPLEALIASGGGFEHVKPAPVEGLEYWRLSGGDPAGTIQMLKEDPAALAVEAREGLL
DLIHQFDDPDMPYHSQPRPAWAPKYTDYAHLARIKEWSAGGGGDAEG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaccccgccgcccgccagcgtcttcaccctggcgcccaacctgccctttgtc
gatgcgctggcggcgggcctttgggaacaggcgggcggggatgcgctggcgctgaaccgg
ttcaccgtgcttctgcccacggcccgcgccgtccgatcgctgcgggaggcgtttttgcgc
ctgtcaggcgggcgacccatcctgctgccccggatggcgccgctgggcgatgtcgatggg
gacgaagtatcgctgatgatggatggggtgacgggcaaggccggcggcctggacctgccc
cccgccatcgcacccttgcgccggcaattgctgctggcccgcgccatcgccgccgccggc
gaccggtttgccaagacccgcgcacaggcggcgcggctggcgcgtgaactagccaaactg
ctggaccagacgcagacggaaatggtggggttcgaccggctgcatgccctggttcccgat
gattatgccgaacattggcaggtgaccctgtccttcctgtcgatcatcgttgaccaatgg
ccggcgatcctggctgccgaaggggccgtggacccggcacaggaacgcaataaccgcctg
ctggcctatgcggcggcgctgcgcgcggcaccgcccgcccatccgatcattgccgccggc
tccaccggctcaatccccgcgacatccgaattgttggccaccattgcacgcctgcccacc
ggatcggtagtgctgccggggttagaccgggattgtgatgatgcaacgtgggaagcgctg
gacgatgcccacccgcaattcggcctgaagcaactgatcgaccgcatcggcgtgacgcgc
gatcaggtgccggactggacccttgccgccggtgtcgccccgtcctgcccgccggcccgc
acggccctgattgcagaggcgctgcgccccgccggcaccacggaggcttggcgtgatctg
ggcgacctagaccccagcgccctttccggcctgacccgcatcgatgccgcaacaccacag
gaagaggccggcatcatcgccctgatcctgcgtcaggcgctggaaatgccgggacagacg
gcggccctggtcacgcctgaccgcaatctggcccgccgcgttgccaccgaactgcgccgc
tgggacatccgtgtggatgacagcgcaggccgccccctggcccagacaccggtcgggtcc
tatctgcgtctgatcatggatacggcggtacagggggcaccgatcccgttactgtcgctg
ctgaaacacccgatggccggggccggctggccggcagggcagttgcggcggcaggcgcgg
ttgctggaaaccgccatcctgcgcggcccccgcccacccgccggtttggaagggttgcgc
cacgccatccgcttcatggcatcggacgccgccgaaaagcgtcgccgcatcaccaacccc
agcatccgcgacgacctgctgactatggtggaccggctggatgctgccatgggcagcctt
gcggcggcggtggccgatggcgaggagcgccccctgtccgactggctgcgcctgcatatc
ggtgccgccgaggcgctggcggcactggagggggaggccgggtccgaccgtctttggcgc
gacaaggatggagaggccgccgcccagtttattgatgaactgcgtgaggcggcggacggt
tacccgccgctgggcggcaaggattatgcgggtttgatggaggtgctgatcgccggcaag
gccgtgcgctccgccttcggtctgcatccgcgcctgcatgtgctgggcctgatggaggct
cggttgcagcagtttgacgtgatggtcctggccgggcttaatgaggggacatggcccccc
gccccgccgcccgacccctggatgtcgcgccccatgcgccgggatttcggcctgcccgcg
ccagagcgtatggtgggacaggcagcccacgatttcgccacctcgtgcggggcgaagacc
ttgtacctgacgcggtcggaacgggtggagggcacgccaacggtgccgtcacgctggctg
ttgcggctggataccgtgctggacaaggcgggtctgcgcgggcggattgaggcggatggc
gattactggcgcggcctgtggcaggcgctggaccgcccggcacaggtgcgcccctgcctt
gctcccgccccgaagccacccctgtcggcccgcccccgcaagctgtcggtcacccagatc
gaaacctggatgcgcgacccctatgctatctatgcggccaaggtgctggacctgtccgcc
ctggaccccattgatgccgatccgggggcggcggagcggggggagatcatccacagggca
ctggatctgttcgtcagccactatcccgacatgttgccgccggacccgctgggcgaactg
atcgctatcgggcgcggggcctttggcgacctgctggaccagccgggtgtcgccgccttc
tggtggccacgttttgagcgggtcgcggaatggttcgtcgcgcaggagacggagcggcga
cgtaccatcaagccgctggccacagaggtcacgggccgcatcaccctgcccggtcctggc
ggcgacttcatcctgacagccaaggccgatcgcatcgaccgcacgcccactggcggcttg
gtcctcattgattacaagactggtaccccgcccacgggcaaggaggtgcggcttggcaag
gccccgcaattgccgcttgaggcgctgatcgccagcggcggcgggtttgagcatgtgaag
ccggcccctgtggaagggctggaatattggcgcctgtcggggggcgatcccgcaggcacc
atccagatgttgaaggaggacccggcggccctggcggtggaagcgcgcgaaggcctgttg
gacctgatccatcagttcgatgatcccgacatgccctatcacagccagccgcgccctgcc
tgggcccccaaatataccgattacgcccacttggcccggatcaaggagtggtccgccggc
ggcgggggagacgcagagggatga
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