Niveispirillum cyanobacteriorum: C0V82_13240
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Entry
C0V82_13240 CDS
T05262
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ncb
Niveispirillum cyanobacteriorum
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncb03400
]
C0V82_13240 (addA)
Enzymes [BR:
ncb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0V82_13240 (addA)
DNA repair and recombination proteins [BR:
ncb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C0V82_13240 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUN31093
UniProt:
A0A2K9ND83
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All DBs
Position
eg_1:2856113..2859628
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AA seq
1171 aa
AA seq
DB search
MTDIRPTDPNVLQRLASDPDSSVWVGASAGTGKTKVLTDRVLRLMLAGTDPSRILCLTFT
KAAAAEMANRIADRLSVWAVQDEDKLRANLHALTGREPSRGEVVAARRLFARVLDTAGGM
KIQTIHAFCQSLLRRFPLEAGLAPNFEVMDDRTAEELLAEAKQSVLLAGRFEPGSFLARA
VDLLTGSVSEDEFNDLLASLTAERGRLKRILDAQGGLEPAIAALRSSLRVADGETDLTVL
SRACAAGAVDERGLRRACATLATGTKTDVERGIGIQVWLDGDEQHRLRGWADYTSLYLTT
EGEPRKSLMTKKPSEADPMALEILQREAARLVAVMEERRRVAVAAHTSALLVLGEALLGR
YQRLKDARGVLDFDDLILAASSLLSGGAGADACAWVLFKLDGGLDHVLIDEAQDTNPEQW
AVVSAIAEEFFAGLGARDDRVRTLFVVGDDKQSIFSFQRADPAEFARMRRHFDAKVNAAQ
RIWRIVDLQTSFRSVGAVLSAVDKVFAGGLARDGVAGPDVEVRHIPHRRGNAGRVEIWPL
VSPQDVVDPDPWSLPLKPEQADKPVARLARTMADQIARWLADGEMLVSRNRPLRPGDIMV
LVRSRDQFVGHLVRALKDRDVPVAGVDRMVLTEQLAVMDLMALARFLVLPEDDLNLAILL
KSPLLGLSEEQLFQVAHGRPGRLWAALTDKAKEDAGLATAWEYLRAILNDTDYRAPYELF
AGVLSRPCPPDPAGSGRRAILSRLGAEAQDPLEEFLTACLLFEREHVASLQGFLHWLEAS
EAEIKRELDTGGGDGPGQVRIMTVHGSKGLQAPIVFLPDTMREPDKSPKILWPEKPLAGE
VPTDPGPPLPLYAPRRGMEDATAGVRRAIANRRRDQEYRRLLYVALTRAEDRLIVCGWEQ
QRKTGGPGSWYRLIESALEGMARPEPFDFTALSPAGWAGTGLVLHEAQTVPVRDEAVAVA
ATSTGVELPAWALEPAPRDPSPSKPLAPSQPDAPEPSLRSPLGADDGLRFKRGNLIHTLL
QVLPETEPARWAEVAAAWLARPAHNLTAMQQAEIGAEALRVLNDPTFAPLFAPGSRAEVP
LVGLVGGRALSGRIDRLCVTDDAVWIVDYKTNRPPPREVEKVPAIYLQQMAAYRAALSRI
YPGKDVRCVLLWTDGPFMMELPGDLMDTHAP
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatccgccctaccgatcccaatgtcctgcaacggctggcctccgatcctgac
agttcggtgtgggtcggcgcgtcggcggggacgggcaagaccaaggtcctgaccgaccgc
gtgctgcgcctgatgctggccggcaccgacccgtcgcgtatcctgtgcctgaccttcacc
aaggcggcggcggcggaaatggccaaccgtatcgccgaccgcctgtcggtctgggcagtg
caggatgaggataagctgcgcgccaacctgcacgccctgacgggacgggaaccgtcgcgc
ggcgaggtggtggcggcccgccgcctgttcgcccgcgtgctggatacggccggcggcatg
aagatccagaccatccatgccttctgtcagtcgctgctgcgccgcttcccgctggaggcc
gggctggccccgaatttcgaggtcatggatgatcgcacggcagaggaattgcttgcggag
gcgaaacagtccgttcttttggcgggtcgttttgaacccggaagctttctggcgcgagca
gtagacctgctgaccgggtcggtgtcggaggatgagttcaacgacctcctggccagcctg
acggcggaacgcgggcggctgaaacgcattttggacgcccagggcggactggaacccgcc
atcgcggccctgcgcagcagtttgcgtgtggcggacggggagacggacctgaccgtcctg
tcgcgcgcctgtgccgccggggccgtggatgagcggggcctgcgccgcgcctgtgccacg
ctggccacgggcacaaagacggatgtggagcgggggatcggcatccaggtctggctggac
ggggatgaacagcaccgtctgcgcggctgggccgattacacgtcgctatacctgacgacg
gagggggagccgcgcaaatccctgatgaccaagaagccatcggaggccgatccgatggcg
ctggagattttgcagcgtgaggcggcgcggctggtcgccgtgatggaggaacggcggcgg
gtggccgtggcggcccatacttcggccctactggtcctgggtgaggcgctgctgggccgg
tatcagcggctaaaggatgcgcggggcgtcctggatttcgacgatctgattctggcggcc
tccagcctgctgtcgggcggggcgggggcggatgcctgcgcctgggtgttgttcaagctg
gatggtggcctggatcatgtgctgatcgatgaggcgcaggacaccaaccccgaacaatgg
gcggtcgtgtcggccattgcggaggaattctttgccgggctgggcgcacgggatgaccgg
gtccgaaccttgttcgtggtgggcgacgataaacagtcgatcttcagttttcagcgcgcc
gaccccgccgaatttgcccgcatgcgccggcattttgatgccaaggtgaacgcggcccag
cgcatctggcgcattgtcgacctgcagaccagtttccggtcggtgggggccgtcctgtcg
gcggtggacaaagtgtttgccggcggtctggcccgcgacggggtggcggggccggatgtg
gaggtgcggcatatcccgcatcggcgtggcaatgcgggacgggttgaaatctggcccctg
gtcagcccgcaggacgtggtcgatcccgacccctggtccctgccgctgaaacccgaacag
gcggacaagcccgtggcgcggctggcccgcaccatggcggatcagatcgcccgctggctg
gccgatggcgaaatgctggtgtcacgcaaccggccccttcggcccggcgacatcatggtg
ttggtgcgcagccgggatcagtttgtgggccatctggtccgcgccctgaaggaccgggat
gtgcccgtggccggcgtcgaccgcatggttttgaccgagcaacttgcggtgatggacctg
atggcgctggcccggttcctggtcctgccggaggatgatctgaacctcgccatcctgctg
aaatcgccgctgttggggttgagcgaggaacagcttttccaggtggcgcatgggcgaccg
gggcggctgtgggcggcactgaccgacaaggccaaggaggatgccggtctggccacggcg
tgggagtatctgcgcgccatcctgaacgataccgattaccgggcaccctatgagctgttt
gccggcgtgctgtcgcggccctgtccgcccgatcccgccgggtcgggtcggcgcgccatc
ctgtcccgtctgggggcggaggcgcaggacccgctagaggagttcctgaccgcctgcctg
ctgtttgagcgggagcatgtggcctccctgcaaggcttcctgcattggctggaggcgtcg
gaggcggagatcaagcgcgagctggataccggtggcggcgacgggccggggcaggtgcgc
atcatgaccgtgcatggatcgaaggggttgcaggcccccatcgtcttcttgccagatacg
atgcgggagccggacaaaagcccgaaaatcctgtggccggaaaagccgctggcgggggag
gtgccgaccgatcccggcccgccgctgccgctttatgcaccaaggcgggggatggaggat
gcgacggcgggggtacgccgggccatcgccaaccgtcggcgcgatcaggagtatcgccgt
ctgctctatgtcgcgctgacccgcgccgaggatcgcttgatcgtctgcggctgggaacag
cagcgcaagacgggtggtcccggctcctggtaccggctgatcgaaagcgcgctggagggc
atggcgcgaccggaaccgttcgatttcaccgccctgtcgcccgccggctgggccggaacc
ggactggtcctgcatgaggcgcagacggtgccggtgcgggacgaggccgtggctgtcgcg
gcgacgtcgacgggggtggaactgccggcctgggcgctggaaccggcaccgcgcgatccc
agcccgtccaagccgctggccccgtcacagcccgacgcgccggaaccgtcgctgcgttct
ccattgggtgcggacgatgggctgcggttcaagcgcggcaacctgatccatacattgttg
caggtcctgcctgagacggagccggcgcggtgggccgaggtggcggcggcctggctggcg
cggcccgcccacaaccttaccgccatgcagcaggcggagatcggggcggaggcgctgcgc
gtcctgaacgacccgacctttgcgccgctgtttgcacccggcagccgggcggaggtgccg
ctggtcggtctggtgggtggccgcgccctgtcaggccggatcgaccggctgtgcgtgacc
gatgatgccgtctggatcgttgattacaagaccaaccgcccgcccccgcgtgaggtggag
aaggtacctgccatctaccttcagcagatggccgcctaccgcgcggccctgtcgcggatc
tatcccggcaaggatgtgcgctgtgtcctgctctggactgacgggccgttcatgatggag
ctgccgggtgacctgatggatacgcatgcgccgtga
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