Niveispirillum cyanobacteriorum: C0V82_13415
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Entry
C0V82_13415 CDS
T05262
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ncb
Niveispirillum cyanobacteriorum
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncb03016
]
C0V82_13415 (rnd)
Enzymes [BR:
ncb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C0V82_13415 (rnd)
Transfer RNA biogenesis [BR:
ncb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C0V82_13415 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUN31125
UniProt:
A0A2K9NFV2
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All DBs
Position
eg_1:complement(2888319..2889470)
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AA seq
383 aa
AA seq
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MSLITTTDALSAFIARVRDAEYVTVDTEFMREKTYWPELCLVQVAGPNEAAAIDPLAPGI
DLSPLYELLADPKVLKVFHAARQDLEIFVNLTGQVPAPLFDTQVAAMVCGFGDSVGYETL
ITKLTPARIDKSSRFTDWSHRPLTDRQLQYALSDVTHLRPAYEKIRAKLTRTGREGWLED
EMAILTDAATYRTEPEDAWKRLKVRTEKPRFLAILKEVAAWREREAQRKNLPRNRVLRDE
ALMEIAAHAPSNVDDLGRTRGLGAGMAQGRYGTEILAAIKTAQAIPDSALPRAEPRVEPA
PGIAPIVELLRVLLKMVCDDNDVASRLVANAADLEAIAGDDKADVQALKGWRRDLFGDAA
LRLKQGKLALAIAGKKVKIVDLG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatcaccaccaccgacgccctgtccgccttcatcgcccgtgtccgtgacgcc
gagtacgtcaccgtcgatacggaattcatgcgggaaaaaacctactggcccgaactgtgc
ctggttcaggtggccgggcccaatgaggccgccgccatcgacccgctggcccccggcatc
gacctgtcgccgctgtatgagctgctggccgacccgaaggtgctgaaggtattccacgcg
gcccgccaggacctggaaatcttcgtgaacctgacgggtcaggtgccggccccgctgttt
gacacgcaggtagccgctatggtctgcggctttggcgattcggtcgggtatgagacgctg
atcaccaaactgacgccggcgcggatcgacaaatccagccgtttcaccgactggtcgcac
cggcccctgaccgaccggcagctgcaatatgcgctgtcggacgtcacgcatctgcgcccg
gcctatgagaagatccgcgccaagctgacccgcacgggtcgtgaaggttggctggaagat
gaaatggccatcctgaccgatgccgccacctaccggacggagccggaggacgcctggaag
cgtctgaaggtccgcaccgaaaagccgcgtttcctggccatcctgaaagaggtcgccgcc
tggcgggagcgggaggcgcagcgcaagaacctgccgcgcaaccgcgtgctgcgggacgag
gcgctgatggaaatcgctgcccatgcgcccagcaatgtcgatgatctgggccgcacgcgc
ggcctgggtgccggcatggcgcagggccggtatggcacggagatcctggccgccatcaag
acggcccaggccattcccgacagcgccctaccgcgcgccgaaccgcgtgtggaaccggca
cccggcatcgccccgattgtggagctgctgcgcgtgctgctgaaaatggtctgcgacgat
aatgacgtggccagccgccttgtcgccaacgccgccgatctggaagccatcgcgggcgat
gacaaggccgatgtccaagccctgaaaggctggcgccgcgacctgttcggcgacgccgcc
ctgcgcctgaaacagggcaaactggcgctggccatcgcgggcaagaaggtgaagatcgtc
gatctggggtaa
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