Notothenia coriiceps (black rockcod): 104940873
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Entry
104940873 CDS
T04920
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104940873 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104940873 (cnot2)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104940873 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104940873 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104940873
NCBI-ProteinID:
XP_010764185
UniProt:
A0A6I9MRX6
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFSDESMYYSQQSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSALGFSVRGMGNSTPQLNRNLTQGSQLPSHITPTTGVPTMSLHTPPSPSRGSLPMNT
RNMLNHSQVGQSIGMSGRTNSMSSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGM
NRNQAFGMPNSLSSSIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPVLNPLAGRA
PYVGMVTKASTEQTQDFSIHNEDFPALPGPNYKDPSLSNDDAKTNLNSVTKSISNADGPK
FPGDKTTSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLA
LGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDI
NT seq
1189 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtcgagttcgttgaggtagtcgataatgacttctcg
gacgaaagcatgtactacagccagcagtcgatgttcccacatcggtcggacaaagatatg
ctgtcgtctccctcgccatcgtcgtcgggtcagctgtcgcagcttggtgcgagtttgtac
ggtccacaaagtgcactcggcttctcagtaagaggcatggggaatagtacgcctcagtta
aaccgaaatctaacgcaaggctcgcagttaccaagtcatatcacccccacgacgggggtc
cctaccatgtccctccatacccctccatcaccaagcagggggtcgttgccaatgaacacg
agaaacatgctaaaccactctcaggtcggtcaaagtattgggatgagcggcaggaccaat
agtatgagcagctccgggctgggcagtccgaaccgaagctcgccaagtatcatctgtatg
cccaaacagcagccagcgcgccagcccttcaccataaacagcatgtcggggtttggtatg
aatcgaaatcaggcttttgggatgcccaactcgttatcgagcagcatcttcaatggcaca
gatgggagtgaaaatgtaacgggactggatctgtcagacttccctgcgttagcagacagg
agtcggagagaagggacgggaaacccaacaccggtgctcaacccactggctggacgggct
ccttatgttggcatggtgacaaaggcttcaacagaacagacgcaggatttctccatccac
aacgaggacttccctgcactgcctggcccgaactataaggacccctcgttgagcaacgat
gacgccaaaactaacttgaactccgtaaccaagagcatatcgaatgcagatggaccgaag
ttcccgggagacaagacgacctcagcacagaacaacaaccagaagaaagggatccaggtg
ttgcccgatggtcgggtgacgaatattccctcaggaatggtgacggaccaattcggcatg
attggcctgctgacgtttatccgggcggcagagactgatccggggatggtccatctagcg
ctaggaagtgacctcacgacactgggactcaacttaaactcaccagaaaacttgtaccct
aagttcgcctcgccttgggcctcgtcgccatgtcgacctcaagacattg
DBGET
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