Notothenia coriiceps (black rockcod): 104940896
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Entry
104940896 CDS
T04920
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03430
Mismatch repair
ncc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104940896
03460 Fanconi anemia pathway
104940896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104940896
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104940896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
Mlh1_C
Motif
Other DBs
NCBI-GeneID:
104940896
NCBI-ProteinID:
XP_010764210
UniProt:
A0A6I9MS04
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MYGFLCRANYSDGKLKGPPKPCAGNQGTQILLEDLFYNVSTRRKALKSPGDEYSRIVEVV
SRYAIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGVFGNAVSRELIEVGCEDQKLAY
KMKGHISNANYSMKKCILVLFINHRLVESAALKKAIETIYAAYLPKNTHPFLYLSLEIAP
HNVDVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSAAGGSEG
QSSSGTAESSDRVYAHQMVRTDCRAQKLDAFLQPKEKTAPDPGSPGPSSREAASRSAQPD
RTEMEETDDADMLQALTRQEAEEPREGGDQADSVQRKRPRKEQQEVEDLTAAATPKRRAI
KLSSIKELRTEITENTHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLVNTTKLRSEPQQ
LTVLLVVGIV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtatggatttctttgcagagccaactacagcgatggcaaactgaaaggccctcccaaa
ccatgtgctggaaaccagggcacacagattcttttggaggacctcttctataacgtgtcc
acccggaggaaagcgttaaaaagccccggagatgagtactcacggattgtggaagtggtc
agcaggtacgccatacacaattcagggaagagtttctccgtcaaaaagcaaggagagacg
gtggcggatgtgaggaccctacccaacgcctctgtagtggataatattcgaggagttttt
ggcaatgcagtcagcagggagctgatcgaagtcggctgtgaggatcagaagctcgcctat
aagatgaaaggacacatctctaatgcaaattactccatgaagaaatgcatcctggtcctg
ttcatcaaccatcgcctggtggagtccgctgctttgaagaaggccatcgagaccatttat
gctgcttaccttcccaagaacacacacccctttctttacctcagcttagagatcgctccg
cacaacgtagacgtgaatgtccatcccacaaaacacgaggtgcacttcctgcacgaagac
agcatcatagagagcgtccagaagcacatcgagagcaaactccttggctccaactcctct
cgcacatatttcactcagacgttgctgccgggtctctcagccgcaggcggcagcgagggg
cagtcctccagcggcacggcagagtccagcgatcgagtctacgcacatcagatggtgagg
accgactgccgcgctcagaagctggacgccttcctgcagcccaaagagaagacggctcct
gaccccggatcacccggacccagcagcagggaggctgcgagcagaagtgcccagcctgac
aggacagagatggaggagacggacgatgcagacatgctgcaggccctgactcggcaggaa
gcagaggagccaagagaaggaggagaccaggcagactctgtgcaaaggaagcgacccagg
aaagagcaacaggaggtggaggacctaacggctgcagctacacccaagagacgagccatt
aaactgtccagcatcaaagagctcagaaccgagatcactgagaacacacacaaaggcctt
caagaaatgttgcagaaccactcgtttgtgggctgcgtcaaccctcagtggactctgatc
caacatcacaccaaactgtacctggtgaacaccaccaaactcaggtcagagccacagcag
ctcactgttctgttagtagttggaatagtttaa
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